Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02391 ATGGATCTGCAAAATGTGCAAAATCAAAGCATGCGTTTGGTTCTCTCCACTGATGCCAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGGTTCACTGAGGCTATTAATCAACTAGGAGGTGCAGAAAAGGCAACTCCAAAGAGCCTTATGAGAGTGATGGGGATTCCAGGACTCACTTTGTACCACCTCAAGAGCCATTTACAGAAATATAGGCTTGGGAAAAGCCAATCGCTAGAAACCTGCTCTGACAACAAGCAACAAGGTTGCAGTGAAATCCAAAGAACTGATAGTCATTGCAGCAAGGCAACCAGTACTGGGACCCAGAATCAGATGAATGAAAGCTTGGAGATAGCTGAGGCTCTTCAAATGCAAATGGAAGTACAGAGGAAACTTTATGAACAAATTGAGGTCCAAAGACATTTGCAGCTTCGAATTGAGGCTCAAGGGAAGTACTTACGATCAGTACTATCAAAGGCACATGAAACACTTGCAAGATACAATTCTTCCACAACGGGCATAGAACTTGCAAAATCTGAACTTTCTCAGTTAGTGTCAATAATTAACAATGCCTGTCCGAACTCTCCCATTTCAGAACTGACAGAAACAAGAGGGCTCAGTTTGAACTGTGGAGAGAGGAAACAAGACAGAGGAACCATGTGCTCACTTGAAAGTTCTTTGACATCATCTGAAAGCTCTGGGAGAACAGAAGAAGGACAACCACTGGATGAGGCAGAGAAGCCTCAAAAGACTACTGTTATTTCAGTTGAATTGCCATCGCTGGAGATTCACTCAGAAGGTACAACATTCAAGGGAGATACAAATGAAGGCAGAAAGAGAAGTGCAGCAACTGATTCTAATGGTTGCTGTGATGATCAACCTTCTGGAAAAAGATGTGGCAACAAGCTGAGGAAATGTGAACTGTCAGAAATGCTTGACTTGAACAGCCAATATCAGAGAGACATTGACTCAAGTGTGAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGAACAATAA 1026 0.425 MDLQNVQNQSMRLVLSTDAKPRLKWTPELHQRFTEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQSLETCSDNKQQGCSEIQRTDSHCSKATSTGTQNQMNESLEIAEALQMQMEVQRKLYEQIEVQRHLQLRIEAQGKYLRSVLSKAHETLARYNSSTTGIELAKSELSQLVSIINNACPNSPISELTETRGLSLNCGERKQDRGTMCSLESSLTSSESSGRTEEGQPLDEAEKPQKTTVISVELPSLEIHSEGTTFKGDTNEGRKRSAATDSNGCCDDQPSGKRCGNKLRKCELSEMLDLNSQYQRDIDSSVKEIDLNCSSSFWEQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02391 341 MobiDBLite consensus disorder prediction 220 251 - -
Spst3g02391 341 MobiDBLite consensus disorder prediction 266 298 - -
Spst3g02391 341 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Spst3g02391 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 273 IPR044848 GO:0003700
Spst3g02391 341 FunFam Myb family transcription factor 19 77 - -
Spst3g02391 341 Pfam MYB-CC type transfactor, LHEQLE motif 118 164 IPR025756 -
Spst3g02391 341 Coils Coil 120 140 - -
Spst3g02391 341 MobiDBLite consensus disorder prediction 221 237 - -
Spst3g02391 341 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Spst3g02391 341 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Spst3g02391 341 Gene3D - 19 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02391 Spst-Chr3 67956710 67958219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02391 11 299 G2-like Transcription Factor Family AT1G69580 50.166 2.61e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst3g02391 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02391 - - gmx:100805252 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02391 3 67956710 67958219 Spst3g02391 3 67956710 67958219 ECH