Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02381 ATGGATGGTACCACCAGCTCTGAACTCCCCCCTGGCTTTAGGTTTCACCCAACGGACGAGGAACTAATCGTGTATTACCTTTGCAACCAAGCCACATCAAAGCCATGCCCTGCTTCTATCATCCCAGAAGTTGATCTCTACAAGTTTGATCCATGGGAACTGCCAGATAAAACAGAATTTGGAGAAAATGAATGGTATTTCTTTAGTCCACGAGACAGGAAGTACCCAAATGGGGTGAGGCCTAACCGAGCAACAGTGTCCGGGTATTGGAAGGCTACTGGCACGGACAAGGCAATCTATAGTGGATCTAAGCTTGTTGGGGTGAAGAAATCTTTAGTATTTTACAAAGGTAGACCACCAAAGGGTGACAAGACTGATTGGATTATGCATGAGTATCGATTGGCTGAATCAAAAAAACCAGCTAGCAGGAAAATAGGGTCCATGAGGCTGGATGACTGGGTCCTGTGCAGGATTTATAAGAAGAAGAGCATGGCAAGAACAATGGAGCACAAAGAGGCACACCCAAAGGTTCAAATAACTAATCTTTTAGCTGCAAATAATGATGAACAGAAAATGATGATGAACCTTCCCAGGACTTGGTCCCTCACATACCTTTTGGATATGAATTATTTGGGTCCAATTTTATCTGATGGCTCCTACAGTTCATCCTTTGATTTTCAAATTAACACCGCCAATATTGGAGTAGAACCCTTTGTAAAATCTCAACCGGTTGAAATGACCAACAATTATGTAGCAGATTCAGGGAAATACTAA 774 0.4264 MDGTTSSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDLYKFDPWELPDKTEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKLVGVKKSLVFYKGRPPKGDKTDWIMHEYRLAESKKPASRKIGSMRLDDWVLCRIYKKKSMARTMEHKEAHPKVQITNLLAANNDEQKMMMNLPRTWSLTYLLDMNYLGPILSDGSYSSSFDFQINTANIGVEPFVKSQPVEMTNNYVADSGKY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02381 257 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Spst3g02381 257 FunFam NAC transcription factor 18 165 - -
Spst3g02381 257 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Spst3g02381 257 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 188 - -
Spst3g02381 257 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Spst3g02381 257 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02381 Spst-Chr3 67569798 67571064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02381 1 225 NAC Transcription Factor Family AT1G69490 65.254 2.95e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst3g02381 NAM 6.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02381 - - gmx:100785110 477.633