Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02372 ATGAGTTCGGGAAGCAATAGTGATAAGGAGAAGGAGAAGCAGAGGGTGAGTCGCACGTCGTTGATACTGTGGCACGCTCACCAAAACGACGCCGCAGCGGTGCGGAAGCTCCTGCAGGAGGATCCTTCGCTCGTTACGGCCAGGGACTACGACAACCGCACCCCTCTCCACGTTGCATCCCTCCACGGCTGGATCGACGTTGCCACATGTTTGATCGAGTTCGGCGCCGATGTCAACGCGCAAGATCGTTGGAAGAACACCCCTCTGGCGGATGCGGAAGGAGCTAAAAAGACTAACGTGATCGAGCTTTTGCAATCTCATGGAGGCTTGTCTTATGGGCAAACTGGAAGCCATTTTGAACCGAAGCCTGTTCCGCCGCCGTTGCCGAATAAGTGTGACTGGGAAATCGAACCTACCGAGCTTGACTTCTCCAACTCCGCCCGAATCGGAAAGGGGTCTTTTGGTGAAATTTTAAAAGCCCATTGGCGTGGAACACCAGTTGCTGTTAAACGTATTCTGCCATCTCTTTCAGAAGATAGATTGGTGATTCATGTCAGTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTCAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCTGTTACAGACAGGAAACCCCTCATGCTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTGCACTTAGTCCAGCAACCGCTATCAACTTTTCCATGGATATTGTGAGAGGAATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGGGATTTTGGATTGAGTAAGCTTATCACTGTCCAGAGTTCTCATGATGTATACAAGATGACCGGTGAAACGGGGAGTTACCGCTACATGGCTCCTGAAGTATTCAAACATCGGAGATATGATAAAAAGGTTGATGTGTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATCTCGAGCCTTATGATGGAGCAAAACGCGCTGCTGAGGGACTAAGGCCTCAATTTCGGTCAAAGGGTTATATTAATGAATTGCAAGATTTAACGGAGCAGTGTTGGGCCCATGACGTGAATCAGAGACCATCCTTCATAGAGATCCTTAAACGTCTTGAAAAGATCAAGGAGAATTTACCTTCAGATCATCACTGGCATTTGTTTGCATCATAA 1269 0.4641 MSSGSNSDKEKEKQRVSRTSLILWHAHQNDAAAVRKLLQEDPSLVTARDYDNRTPLHVASLHGWIDVATCLIEFGADVNAQDRWKNTPLADAEGAKKTNVIELLQSHGGLSYGQTGSHFEPKPVPPPLPNKCDWEIEPTELDFSNSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIHVSQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGALSPATAINFSMDIVRGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFANLEPYDGAKRAAEGLRPQFRSKGYINELQDLTEQCWAHDVNQRPSFIEILKRLEKIKENLPSDHHWHLFAS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02372 422 Pfam Ankyrin repeats (3 copies) 18 82 IPR002110 GO:0005515
Spst3g02372 422 SMART ANK_2a 51 80 IPR002110 GO:0005515
Spst3g02372 422 Gene3D Phosphorylase Kinase; domain 1 128 225 - -
Spst3g02372 422 FunFam Integrin-linked protein kinase family 225 420 - -
Spst3g02372 422 PRINTS Tyrosine kinase catalytic domain signature 221 234 IPR001245 GO:0004672|GO:0006468
Spst3g02372 422 PRINTS Tyrosine kinase catalytic domain signature 375 397 IPR001245 GO:0004672|GO:0006468
Spst3g02372 422 PRINTS Tyrosine kinase catalytic domain signature 259 277 IPR001245 GO:0004672|GO:0006468
Spst3g02372 422 Pfam Protein tyrosine and serine/threonine kinase 146 404 IPR001245 GO:0004672|GO:0006468
Spst3g02372 422 ProSiteProfiles Ankyrin repeat profile. 51 83 IPR002110 GO:0005515
Spst3g02372 422 PIRSF ILK 1 422 - -
Spst3g02372 422 Gene3D Transferase(Phosphotransferase) domain 1 226 418 - -
Spst3g02372 422 FunFam serine/threonine-protein kinase STY46-like 136 225 - -
Spst3g02372 422 SUPERFAMILY Ankyrin repeat 22 109 IPR036770 -
Spst3g02372 422 Gene3D - 2 118 IPR036770 -
Spst3g02372 422 SMART serkin_6 143 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02372 422 ProSiteProfiles Ankyrin repeat region circular profile. 51 83 - -
Spst3g02372 422 CDD STKc_MAP3K-like 149 404 - -
Spst3g02372 422 SUPERFAMILY Protein kinase-like (PK-like) 133 417 IPR011009 -
Spst3g02372 422 ProSitePatterns Protein kinases ATP-binding region signature. 149 170 IPR017441 GO:0005524
Spst3g02372 422 ProSiteProfiles Protein kinase domain profile. 143 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02372 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Spst3g02372 422 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 77 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02372 Spst-Chr3 67427539 67433773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02372 8 422 MAP Kinase Kinase Kinase AT1G14000 84.337 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Spst3g02372 PK_Tyr_Ser-Thr 1.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02372 - - gmx:100793237 786.178