Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02350 ATGGAGAGGAAAGGAGGAGCACCACCCTCGACGGCGGCGCGTCCCAGGAATAATATCCGATCACACGCTTCCACGGAGGGAGTTTTCAACGGCGGGGCCACCGTGGGGTATAGCCCTGGTCCCATGACTCTACTTTCCAACTTATTCGGCGATGGCGATGAGTGTAAGTCGTTCTCGGAGCTCCTCGCCGGCGCCATAGTGGACCCCACCCCACCCCAGTTCTTTCTTGATTCACCTTCTCAGGCTGTAGAATGGTCTAACATACGAAAGGATAAGATCATAAATAAGATGGTAAATGTACGTGAACATTATATGAAAGAAAGTGATGCAGCAAAAGGACACTTTGGAATGACAGACCAGCAAATGCTAGCACAGGTCACACACTCCAATGTGCAAATCCAAGCTGAACATCCATTCTCCACAGCAGTGCCTGCTACCACATTGACACAGTTTCACTCTCCATCTGTCAATGCTGATAAGCCTAATGAAGATGGATATAACTGGAGGAAGTATGGGCAGAAACATGTCAAGGGTAGTGACTTTTCTCGAAGTTATTACAAATGCACACATCCAAATTGTCCTGTCAAGAAAAAGCTTGAACGATCTCTTGGGGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAACCATCCACGTCCTCATCCCAGTAAGACCACAAGAGGTACCCTAACTTCAACTGAAAATTCAGATAAGTCGAAAGAAGAGATGAGTTCTCAGATGGATCTAGAATCTAGTCAGGCAACAGCTGAACATGGGTCGGGGACAAGTGATAGTGATCATGAGACTGAAGTGGATGAGAAAAATGATGAACCTGATCGCAAGAGGAGAAACACAGAAGCCAGACACCAGGATCCAGACTCTTTGCATAGAACTGTGGCAGAACCTAGAATCGTTGTGCAGACAACAAGTGAAGTGGATCTCTTGGATGATGGATATAGATGGCAGTGCGAGATGCATGGTTTTACGGTGTGTAGGAGCTATTACAAGTGCACAACCCCAGGTTGCAATGTTCGAAAGCATGTTGAGAGGGCTTCAACTGATCCTAAAGCTGTCATAACAACGTATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAGAACTAATAGCCACACACTTGCCAACAATAATGCATCACAGCTGAAAGAACAAAATGCCACACCCAATGAGACGCATCGTTTCAGCAGCAGGGGTGTTGGGGGTTATGAACAGCGACCTGTGGAAAATCTAAGATTGAAGGAAGAGCATATAACTTAG 1281 0.459 MERKGGAPPSTAARPRNNIRSHASTEGVFNGGATVGYSPGPMTLLSNLFGDGDECKSFSELLAGAIVDPTPPQFFLDSPSQAVEWSNIRKDKIINKMVNVREHYMKESDAAKGHFGMTDQQMLAQVTHSNVQIQAEHPFSTAVPATTLTQFHSPSVNADKPNEDGYNWRKYGQKHVKGSDFSRSYYKCTHPNCPVKKKLERSLGGHVTAIIYKGEHNHPRPHPSKTTRGTLTSTENSDKSKEEMSSQMDLESSQATAEHGSGTSDSDHETEVDEKNDEPDRKRRNTEARHQDPDSLHRTVAEPRIVVQTTSEVDLLDDGYRWQCEMHGFTVCRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARTNSHTLANNNASQLKEQNATPNETHRFSSRGVGGYEQRPVENLRLKEEHIT 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02350 426 Gene3D WRKY domain 301 373 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 Gene3D WRKY domain 149 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 MobiDBLite consensus disorder prediction 388 415 - -
Spst3g02350 426 Pfam WRKY DNA -binding domain 317 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 SMART WRKY_cls 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 SMART WRKY_cls 316 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 MobiDBLite consensus disorder prediction 388 402 - -
Spst3g02350 426 MobiDBLite consensus disorder prediction 262 299 - -
Spst3g02350 426 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g02350 426 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 126 393 IPR044810 GO:0003700
Spst3g02350 426 ProSiteProfiles WRKY domain profile. 157 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 ProSiteProfiles WRKY domain profile. 311 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 MobiDBLite consensus disorder prediction 212 303 - -
Spst3g02350 426 MobiDBLite consensus disorder prediction 247 261 - -
Spst3g02350 426 SUPERFAMILY WRKY DNA-binding domain 308 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 SUPERFAMILY WRKY DNA-binding domain 160 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g02350 426 FunFam WRKY transcription factor 151 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02350 Spst-Chr3 67213322 67215553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02350 12 62 WRKY Transcription Factor Family AT2G03340 54.902 2.55e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g02350 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02350 - - vun:114179749 533.102