Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02340 ATGCTATTACTATTACCACCTCAGTTTGCTTCGCAACCGGGCTTTTCTTTTCCATCAACACCCAAACTCAAGGTTGTGTCCGAAGCTGATGTCTTTCCTTCATTTCTCCCTACAGAAGTCCAAAGGATCAAAGACCCTTTTGCCAGAAGCCTTGCTACCCGGATTCAGAGACTTCCCGTTTCGGTTAGGTTCTCTGAAGATCCTATCATGAGTAGTTGCGTGAAGCCGTTGATGCAGAACAACGAAAATCCTGTTGTCTTACTTCATGGATTTGACAGCTCATGTTTAGAATGGAGATACACATATCCATTGCTTGAGGAAGCTGGTTATGAGACATGGGCAGTTGACATTCTTGGTTGGGGTTTCTCTAATCTAGAAAAACTTCCTTCTTGTGATGTGGTTTCAAAGCGTGATCACTTATATCAGTTTTGGAAGTCGCATATCAAAAGGGCTATGATATTGGTTGGTCCAAGCCTTGGCTCTGCGGTTGCCATTGACTTTGCGGTTAATTATCCAGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCAAGTGTGTATGCCGAAGGAACAGGAAACCTAGCAACCTTACCTAGAGCGGCAGCCTATGCTGGGGTATATGTATTGAAGAGCATTCCATTACGCTTATATGCTAACTATTTGAGCTTCACTAATTTTTCTTTCAGTACCAGCCTCGATTGGACTAATGTGGGCCGCTTGCATTGTTTATTGCCATGGTGGGAGGATGCTACAGTTGATTTCATGACTAGTGGTGGTTATAATGTTTCCTCCCAGATAAAAAAGGTAAAGCAGAAAACTCTGGTCATTTGGGGGGAGAATGACCGCATAATCAGCAATAAGCTTGCTGTGAGACTGCATTGTGAATTACCTGATGCCATTATACGCCAAATACCCGATTGTGGTCACCTTCCTCATGTTGAAAGGCCAGATTCCGTAGTCAAATTCATTGTTGAATTTGTTCAGAGCAAGACCAAGACAGAAAATGAATGTGTTTCACCTTTGTGA 1023 0.4282 MLLLLPPQFASQPGFSFPSTPKLKVVSEADVFPSFLPTEVQRIKDPFARSLATRIQRLPVSVRFSEDPIMSSCVKPLMQNNENPVVLLHGFDSSCLEWRYTYPLLEEAGYETWAVDILGWGFSNLEKLPSCDVVSKRDHLYQFWKSHIKRAMILVGPSLGSAVAIDFAVNYPEAVEKLVLIDASVYAEGTGNLATLPRAAAYAGVYVLKSIPLRLYANYLSFTNFSFSTSLDWTNVGRLHCLLPWWEDATVDFMTSGGYNVSSQIKKVKQKTLVIWGENDRIISNKLAVRLHCELPDAIIRQIPDCGHLPHVERPDSVVKFIVEFVQSKTKTENECVSPL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02340 340 PRINTS Epoxide hydrolase signature 89 107 IPR000639 GO:0003824
Spst3g02340 340 PRINTS Epoxide hydrolase signature 168 181 IPR000639 GO:0003824
Spst3g02340 340 PRINTS Epoxide hydrolase signature 109 124 IPR000639 GO:0003824
Spst3g02340 340 PRINTS Epoxide hydrolase signature 303 325 IPR000639 GO:0003824
Spst3g02340 340 PANTHER HYDROLASE 26 329 - -
Spst3g02340 340 SUPERFAMILY alpha/beta-Hydrolases 81 327 IPR029058 -
Spst3g02340 340 Gene3D alpha/beta hydrolase 75 335 IPR029058 -
Spst3g02340 340 PRINTS Alpha/beta hydrolase fold signature 154 167 IPR000073 -
Spst3g02340 340 PRINTS Alpha/beta hydrolase fold signature 168 181 IPR000073 -
Spst3g02340 340 PRINTS Alpha/beta hydrolase fold signature 272 286 IPR000073 -
Spst3g02340 340 PRINTS Alpha/beta hydrolase fold signature 109 124 IPR000073 -
Spst3g02340 340 Pfam Alpha/beta hydrolase family 85 320 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02340 Spst-Chr3 67052804 67058805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02340 78 326 Miscellaneous Gene Families AT1G52750 24.731 5.19e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02340 - - vun:114179002 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02340 3 67052804 67058805 Spst3g02340 3 67052804 67058805 ECH
Spst3g02340 3 67052804 67058805 Spst2g01670 2 15662454 15667858 PCT