Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02337 ATGGCTTCTTGCATTTCTCATGAAAATGATGGTGTGCGAGAATTTCTAGCTGAAGTTTCAAGCCTTGGGAGACTGAAACAAAGGAATTTGGTGGGGTTGAGAGGTTGGTGCAAGAAAGATGTTGAGAGTTTCTTATTAGTCTATGACTACATGGAAAAGGGTAGCTTAGACAAGAGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAGTTATGAAGATAGGATAAGGATTGTGAAAGATGTGGCTTTTGCAGTTTTGTACTTGCATGAGGGGTGGGAAGCTAAGGTTGTGCATAGGGACATCAAGATCAATAATGTTTTACTTGATAAAGATATGAATGGAAGGCTTGGGGATTTTGGGTTAGCCAGAATGCACAACCACGATTGGAAAGAAAAAGTAAAAAAATGTGGAGGGTTACCGTTGGGGAGTTCACTGTTCTCAAGGGTTGATAAGAAAGAGTGGGAGTTTATAAGAGACAATGAGATTTGGAATTTAAGACAAAATGAAAAAGGCATTTTGTCTACTCTTAAATTAAGTTACGATCAACTACCTTCGTATTTAAAACCATGTTTTGCTTCTTTCACACTTTTTCCTGTGGACACTAATACTTATGGTTCTGGAGTTACTAAGGTGTGGGAAGCTCTTGGTTTTCTTCCACCACCAAAGGAATATGAATCAATGGTTACTGTTGACAAGCAAATTTTGCATGAGCTATGTTTACCTCGCTGCATCGAAAAGTTGAAACATTTCAGATATCTCAGTCTTACGGGTTGTGAAAATCTTGAGGAACTCCCTGATTCAATATGCAAACTTCAAAATTTGCAGACTTTGAACGTCAATCGATGCATAAAGCTACAAAAATTACCCAAAGGAATAGGAAATCTAATATACCTTCGTCACCTGACTATAACCACCAGACAACCTGATTTTCCTGAAAAAGAGATTGCAAATTTGACTTCTTTAGAAATTTTACATTTTCTTAATTGTGATAACGCGGAGACATTGTTCACAGGGATACAACTTCCTAATCTTAAAAATTTGTTTTTGATTGAATATGGGAATCTGAAGTTAGTGTCATTTCATGCCATTAGAAATGTAGAGGTTTTGAGGATCACAAAGTGTTGTAAGTTGGAATTGTGGATGGGCCTTAACAGTCAAATCCCGGATTTTTCTTGTTCTTTTTTATTTAGCACAGTTGATCACTTTGCCTCAGTGGTTGGAAGGATCTGTGAACACCTTACATACCTTAGTCTTTCTCACCCCT 1264 0.3742 MASCISHENDGVREFLAEVSSLGRLKQRNLVGLRGWCKKDVESFLLVYDYMEKGSLDKRVFDCDESKMLSYEDRIRIVKDVAFAVLYLHEGWEAKVVHRDIKINNVLLDKDMNGRLGDFGLARMHNHDWKEKVKKCGGLPLGSSLFSRVDKKEWEFIRDNEIWNLRQNEKGILSTLKLSYDQLPSYLKPCFASFTLFPVDTNTYGSGVTKVWEALGFLPPPKEYESMVTVDKQILHELCLPRCIEKLKHFRYLSLTGCENLEELPDSICKLQNLQTLNVNRCIKLQKLPKGIGNLIYLRHLTITTRQPDFPEKEIANLTSLEILHFLNCDNAETLFTGIQLPNLKNLFLIEYGNLKLVSFHAIRNVEVLRITKCCKLELWMGLNSQIPDFSCSFLFSTVDHFASVVGRICEHLTYLSLSHP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02337 421 FunFam Os07g0541700 protein 51 137 - -
Spst3g02337 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672|GO:0006468
Spst3g02337 421 Gene3D Ribonuclease Inhibitor 228 421 IPR032675 -
Spst3g02337 421 PANTHER - 10 128 - -
Spst3g02337 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 192 IPR027417 -
Spst3g02337 421 Pfam Protein tyrosine and serine/threonine kinase 9 140 IPR001245 GO:0004672|GO:0006468
Spst3g02337 421 SUPERFAMILY L domain-like 233 419 - -
Spst3g02337 421 ProSiteProfiles Protein kinase domain profile. 1 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02337 421 Gene3D Transferase(Phosphotransferase) domain 1 3 143 - -
Spst3g02337 421 SMART serkin_6 3 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02337 421 SUPERFAMILY Protein kinase-like (PK-like) 9 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02337 Spst-Chr3 67019770 67023113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02337 5 138 Receptor kinase-like Gene Family AT4G04960 64.706 1.42e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst3g02337 PK_Tyr_Ser-Thr 2.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02337 - - vum:124842909 238.424