Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02325 ATGTTTTCTCTCAGATCAACTGAAAGAGTGGCTAGTGGTAGAGTTGCATTAGAAAATGAAGTCCCATTACAACTGCTGCCTGATCTTACAACAAATTTGCAATGGGATGAGGTTAAACCACTTTCAGGAAAACTATACTGGCATACTGTTCTTGCACGTTCAAATCTCCATTCCCGTTATTATATGTGGCCTCCTACCAACGTACGGTTAAAACTTCCTTCATGTGAGGTCCCCACCACTCTCACTTGTAAGGGCAAGAGCTGGGACATGGTGTATTGTGGACAAAACAAACAGCAGGTTTTCAATGTTGCAGGCTGGAAAAAATTTGCCGTTGAAAATTGTTTGAGGATTGGAGATGCATGCATTTTTGAGCTCATGGAAAGCAGTGACAAAAAAGTCATCTTTGAAGTTCAAATTCTTAGAGGGGACATCCCATCCGAAATTCTTGAAAATGAAATGATCACGGGTCTGAGTCGGGAAATGCCAATTGTCCTTAACTAG 501 0.4132 MFSLRSTERVASGRVALENEVPLQLLPDLTTNLQWDEVKPLSGKLYWHTVLARSNLHSRYYMWPPTNVRLKLPSCEVPTTLTCKGKSWDMVYCGQNKQQVFNVAGWKKFAVENCLRIGDACIFELMESSDKKVIFEVQILRGDIPSEILENEMITGLSREMPIVLN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02325 166 ProSiteProfiles B3 DNA-binding domain profile. 84 143 IPR003340 GO:0003677
Spst3g02325 166 CDD B3_DNA 85 141 IPR003340 GO:0003677
Spst3g02325 166 Pfam B3 DNA binding domain 82 135 IPR003340 GO:0003677
Spst3g02325 166 SMART B3_2 46 143 IPR003340 GO:0003677
Spst3g02325 166 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 68 145 IPR044837 -
Spst3g02325 166 SUPERFAMILY DNA-binding pseudobarrel domain 44 141 IPR015300 -
Spst3g02325 166 Gene3D - 38 143 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02325 84 137 REM Transcription Factor Family AT4G31680 38.889 4.49e-06 43.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Spst3g02325 B3 6.1e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02325 - - gmx:100804948 236.498