Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02323 ATGGAGTTAGAGGTGAAGGTGGTGGGAGGCATAGACTCCTGTTTCGTATCCCTTCCCCTATCTCTCATTCAACTTCTTCAGTCCACGCGCTCATCATCACTTCCTCAAATCCTCGCTCTCGAGCTTCGCTCTCCCCCTCACACCTGGTTCGTCGCTTGGTCCGGCGCCACTTCCGCTTCTTCCGCCATAGAGGTTTCTCCTCAATTTGCGGAATGCGTTTCCTTGCCGAATCACGCTAATGTTCAAGTCAGAGCTGCTCTCAATGTGCCGCACGCTTCAAGAGTCATCATAGAGCCGAACACAGAGGATGACTGGGAAATCTTGGAGCTCAACGCCGAATTAGCCGAGGATACAATCCTCAGCCAGGTAAGAATTGTCTATGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCATACTGTCATCACATTCCAAGTGGCTTCTGTTTTTCCGAAGAATGTGGTGGTACAACTAATGCAAGATACTAAAGTTGCTGTTGCTCCAAAAATACGCAAAAAGAGTTTGGATTCAGTAGATAAAGAGCATACTGCTAAGATGCTGCTTCGATTACAAGATCCAAATGGATTATGTAGTACCAGTACTCATGTTAAAGGAGTTGAGCTTCATGTAGGGCTTACGTCTGTTGCTTTTGTTCATCCAGAAACAGCCAAAAAATACTCATTCAACATGCTTCAGTTGGTTTTGATAGTACCCAGAACATCCCAGGAGAATGTTAATATTTCCAAAACAAATATTATGAAAACCGGAAGTGGTTCAGCTACTAATGAAGTTGAGAATGTATATACTGACAAGACAGAATATCGACAAGCAATTGTTCAGCTGATGGTTTCAGAATCCGTGGCTGAAGGACACGTGATGGTAGCTAAGTCTCTTCGCCTTTATTTGAGAGCTAGCCTACATTCATGGGTTTATTTGAAGGCATACAATATTATTTTGGAAAAAAATATTCCTTCTACCTCTCTTTTTCCATGCCAATTCAAACTAATAAGGCGCAAGAATGCTGTTGAGAAAGATGGTCTAGAAGTTTCTCATGGCCACAATAATCACATTGATAAAAAAGTCCAAGCAAAAGCTACATCAGGTGTCTTTGTTGATACTATAGATTGGTCAATCCAAAATGAAGTTTTAGCAGCTCTCGTTGATGAATCCAATTACAAAGCAGAGGAAGAGACCACAAATCAATCTCAGAATCAAAGGGGATTACAGAGTCTTGTACAACTATGGTATATCACACAACTTAAGGCAATTACTTCCATTTCGGGTATGGAGGTTAGTTCATTGATTATGGGAAATAAAACATTGCTTCATTTTGAAGTAAGCTGTTACAAGCTTGGGAGTAATGGGAAGGTTCAGTTGGCCTACAATCCTTCAGAGAACAATGGCAAGGCAACTGAAATGTTGTTTTTATTGACCTTTGATGAAGAATATCTGCATAATGGGAAACTTAGTGCATATGAAGTTGCTCTTGGTGGAGGACTTGATAACATTAATATTGTGGACCTGAAGTTTTTCGAAAGGATGAAATTGTGTGATCCTGTGTCTTTTCTTTCTATAGAAGAGAGAACCTCTGAAGACCAGATTAGTTCAAATCTATCTTCCCTTGGCTGGATGGAGAAAACTGCAGATGATGTTATCAATAGTAAGTCTTTTTTGGGTGCTGAGGGCTCTGGGAAAACTATATTAGCAAGAACTGTGGCAAAATCCCTTGAGAATCGTGAGGACATCTTAGCACACATAATTTTTATTTCCTGCTCAAAACTTTCCCTGGAGAAGGTCCCAGTTATTCGCCAAAGACTTGCAAACCATGTAACTGAAGCTTTAAACCATGCTCCTTCTATTGTCATCTTTGATGATCTTGATAGCATAATTTCTTCCCCTGACTCCGAATCTCAACCGTCAATATCTGTTGCTGGACTCACAGATTTTCTGGTTGACATCATGGATGAATATGGGGTCATTGACCTTGCCAGAGGTTTACCTGTTGAGTTACCATCAAGATCAACTCACCTCCGGTCTGAGGTACTAGGCACTCCAAATGTGTCCTCAAACCTGGTGCAACCTTCAAGAAGGCTGAAATCAAAACAGGAGAAGAGGCAAAAATCATGTGGCTTGGGACCAATAGCCTTCATAGCTTCCATACAATCCCTAGAGAAGATACCACAATCTCTTAGCTCTTCAGGACGGTTTGACTTTCACATAAAGCTGCCTGCTCCTGCAGCCTCTGAACGCAGGGCTATGTTGAAGCATGAAATACAAAGGCGTCACTTGCAATGTGATGATAACATCTTGCTTGACGTGGCTGTAAAATGTGATGGTTATGATGGTTATGATCTGGAAATATTAATTGACAGAACTGTCCATTCTGCTGTTCGCCGTTTTCTTCCGTTGAATGCTTCAATTGATGTGCATGAGAGTCCGGCTATACTAAGGGAGGATTTCTCTCAGGCAATGGTTGATTTTCTTCCAGTTGCAATGCGTGATATCACAAAATCAGCTTCTGATGATAGCCGTTCTGGATGGGATGATGTGGGTGGTCTTGTTGACATTCGAAATGCTATAAAGGAGATGATAGAGCTGCCATCGAAGTTTCCAAAAACTTTTGCACAAGCACCGTTGAGGTTGCGGTCAAATGTCCTTTTATATGGTCCTCCCGGTTGTGGCAAAACTCACATAGTTGGTGCTGTGGCCGCCACTTCTTCACTTCGATTCATATCAGTTAAAGGGCCAGAGCTGTTAAACAAGTACATTGGTGCTTCCGAACAAGCTGTTAGGGATATATTCTCTAAAGCAGCAGCTGCAGCACCATGTCTACTTTTTTTTGATGAATTTGATTCTATTGCCCCCAAGAGAGGGCATGACAATACTGGAGTCACTGATCGAGTTGTTAATCAATTTCTGACTGAGCTAGATGGTGTTGAAATTTTAACTGGTGTATTTGTGTTTGCTGCTACCAGTAGACCAGATTTACTTGATGCTGCACTGTTGAGACCTGGTAGGTTAGATCGTCTTCTATTCTGTGACTTTCCGTCCTGGCATGAGAGATTGGAAATTCTTGCTGTACTTTCTAGAAAGTTAGCAATGGCCAAGGATATTGATTTGGCTACAATAGCTAATATGACTGAGGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTCTCAGATGCGCAGCTTGCGGCAGTTCATGATGTTCTGGACAACGTAGATGCCTCTAGGCCAGAAAAAACACCAGTTATTACTGATTCTCTTCTGAAGTTGACAGCATCCAAGGCTAGACCATCTGTGTCAGAAGAAGAGAAGAGAAGACTCTACAATATATATCACCAGTTCCTGGATTCAAAGAGATCTGTTGCTGCCCAGTCAAGGGATACAAAAGGCAAGAAGGCAACTTTAGCTTGA 3417 0.4208 MELEVKVVGGIDSCFVSLPLSLIQLLQSTRSSSLPQILALELRSPPHTWFVAWSGATSASSAIEVSPQFAECVSLPNHANVQVRAALNVPHASRVIIEPNTEDDWEILELNAELAEDTILSQVRIVYEGMRFPLWLHGHTVITFQVASVFPKNVVVQLMQDTKVAVAPKIRKKSLDSVDKEHTAKMLLRLQDPNGLCSTSTHVKGVELHVGLTSVAFVHPETAKKYSFNMLQLVLIVPRTSQENVNISKTNIMKTGSGSATNEVENVYTDKTEYRQAIVQLMVSESVAEGHVMVAKSLRLYLRASLHSWVYLKAYNIILEKNIPSTSLFPCQFKLIRRKNAVEKDGLEVSHGHNNHIDKKVQAKATSGVFVDTIDWSIQNEVLAALVDESNYKAEEETTNQSQNQRGLQSLVQLWYITQLKAITSISGMEVSSLIMGNKTLLHFEVSCYKLGSNGKVQLAYNPSENNGKATEMLFLLTFDEEYLHNGKLSAYEVALGGGLDNINIVDLKFFERMKLCDPVSFLSIEERTSEDQISSNLSSLGWMEKTADDVINSKSFLGAEGSGKTILARTVAKSLENREDILAHIIFISCSKLSLEKVPVIRQRLANHVTEALNHAPSIVIFDDLDSIISSPDSESQPSISVAGLTDFLVDIMDEYGVIDLARGLPVELPSRSTHLRSEVLGTPNVSSNLVQPSRRLKSKQEKRQKSCGLGPIAFIASIQSLEKIPQSLSSSGRFDFHIKLPAPAASERRAMLKHEIQRRHLQCDDNILLDVAVKCDGYDGYDLEILIDRTVHSAVRRFLPLNASIDVHESPAILREDFSQAMVDFLPVAMRDITKSASDDSRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAVAATSSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILAVLSRKLAMAKDIDLATIANMTEGFSGADLQALLSDAQLAAVHDVLDNVDASRPEKTPVITDSLLKLTASKARPSVSEEEKRRLYNIYHQFLDSKRSVAAQSRDTKGKKATLA 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02323 1138 PANTHER AAA-FAMILY ATPASE 219 1113 - -
Spst3g02323 1138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 556 803 IPR027417 -
Spst3g02323 1138 Gene3D - 745 825 - -
Spst3g02323 1138 Gene3D - 846 1108 IPR027417 -
Spst3g02323 1138 Pfam ATPase family associated with various cellular activities (AAA) 557 743 IPR003959 GO:0005524|GO:0016887
Spst3g02323 1138 Pfam ATPase family associated with various cellular activities (AAA) 885 1012 IPR003959 GO:0005524|GO:0016887
Spst3g02323 1138 FunFam Nuclear valosin-containing protein-like 843 1021 - -
Spst3g02323 1138 SMART AAA_5 551 746 IPR003593 GO:0016887
Spst3g02323 1138 SMART AAA_5 881 1017 IPR003593 GO:0016887
Spst3g02323 1138 FunFam PeRoXisome assembly factor 1016 1094 - -
Spst3g02323 1138 FunFam Peroxisome biogenesis factor 1 90 169 - -
Spst3g02323 1138 CDD RecA-like_PEX1_r2 856 1013 - -
Spst3g02323 1138 Gene3D - 90 170 - -
Spst3g02323 1138 SUPERFAMILY Cdc48 domain 2-like 90 168 IPR029067 -
Spst3g02323 1138 Gene3D - 1016 1095 - -
Spst3g02323 1138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 847 1112 IPR027417 -
Spst3g02323 1138 Pfam AAA+ lid domain 1037 1076 IPR041569 -
Spst3g02323 1138 SUPERFAMILY ADC-like 10 86 IPR009010 -
Spst3g02323 1138 Gene3D - 543 743 IPR027417 -
Spst3g02323 1138 Pfam Peroxisome biogenesis factor 1, N-terminal 94 168 IPR015342 GO:0005524|GO:0005777|GO:0007031
Spst3g02323 1138 ProSitePatterns AAA-protein family signature. 985 1003 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02323 Spst-Chr3 66777499 66818438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02323 879 1077 Calmodulin-binding Proteins AT3G56690 39.500 1.28e-37 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02323 K13338 - gmx:100803882 1809.65