Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02321 ATGTCTGTCGATGGAAACGTGGAGAGGAACCAAAGCTATAAATCCTCCTCCTCCTTCCTCTACCATTCTCATGTCCTATTAGAACTTCAGAAGAAGGGAAACATGAAAGATGGTGGTAGGAAGCAGGGTGCACCCTCACCCTGTGCTGCATGCAAACTCCTTCGGAGAAGGTGTGCTCAGGATTGTGTTTTTGCTCCTTATTTTCCTGCTGATGAACCCCACAAGTTTGCAAATGTCCACAGAGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGTTCACACATATCTAAGTCCATGGATTAAACATTTCGGTTTTCAGAAACAAGAATATGGATCTGGTGGTAGATGTGACTCTAATTTTCCTCAGATTTATTCGATGATTAAATTACATAAGACCCAATTGGCTGTGGCTCAAGCTGAAGCTGTGCACCTCAGAGTGCGCCAGAGTGCATCCCTCTACAGCCCCACTAGCCCTACCAACAGTGCCTCTCCATCATCCAAGATCATTCACTCACAATCCAAGCCCATTTTTGACATGGAGATGGACATGATATGCCAAGAATTTCATGAATTCCGATTGCAGCAGCCCTCTGCACCGTTAGATGCATAA 615 0.452 MSVDGNVERNQSYKSSSSFLYHSHVLLELQKKGNMKDGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHRVFGASNVNKMLQVHTYLSPWIKHFGFQKQEYGSGGRCDSNFPQIYSMIKLHKTQLAVAQAEAVHLRVRQSASLYSPTSPTNSASPSSKIIHSQSKPIFDMEMDMICQEFHEFRLQQPSAPLDA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02321 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 44 93 - -
Spst3g02321 204 Pfam Lateral organ boundaries (LOB) domain 47 94 IPR004883 -
Spst3g02321 204 ProSiteProfiles LOB domain profile. 46 150 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02321 Spst-Chr3 66724887 66730896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02321 35 154 AS2 family AT1G31320 57.812 2.82e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst3g02321 LOB 2.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02321 - - vum:124847068 196.823