Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02309 ATGGCAGAGAATGCGAAAAGCGAGCAAATCGTGGATGTAGGAACGGTGGTGGAAGCCGTTTCGGCTGATGATGGTGACGCCCCACTCTACAGCCTCGAAAGTCTTTGCATGCGATGTGGTGAAAACGTAAGTTTCTCCCTGTTTCTCGCCACCGCTTGCTCTTCCTTTAACCTTTCACTTAATTCAGCGTCACTTAGCACCTGGGTTGATGCATTGCACAAGCAGTTTGGAGGTGGACGGGGATTTTGTTGTCAGCTTTTGAATGTCCACATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCGCGTGGTTGTTGTTACACTCTGGATATCCCGTCAGGCGAACAGAAGGATCATACAATCCTATGAGTTGAACAGACCCTGGAAAATCCCTTTGGTCTCATTTGTGAAGCCCTTCCAAACCATTCCTGATCTTCTCCAACCTCCTCCAGGAATGCTAAATCGACAAGTGGTTAAATCAGAATCTGCTACCATTAAGATACCGGAACTGGATTTTGAGATTCCTCCAGAAGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTTATGAGAGCAGCTGATGAACTTCAGGCCCTTCAAGAAGAACGCAAAAAAGTGACTCCTGAGACAGCTGAAGCAATTGATCAGTTCTTGGTTAAACTGCGTTCCTGTGCAACAGGAGAATCAGCTTTCAGATTTATTCTTGATGATCCTGCCGGAAACAGCTTCATTGAAAACCCGTTTGCACCGTCATCTGATCCATCATTGTCGATCAAGTTTTATGAGAGAACTGCTGAGCAGCAAGCATCATTGGGATACCTTGTCGATTCCACACAGATTGAAGGAACTCATGGTGATGCCCTTGAAGGGAGAGATGCTGTGAATACTGATCAAGTGGGAAGAGAGCCTCATGGATCAATAGGGGCAACAGCTGGCCATCGAGCCATTGCACAGAGTAACAGTGCAGAAATTGCTGAATCCTTGTTTCGATATACTGCCCCAGAAGAAGTTATGACTTTCCCATCTTCTTGTGGTGCCTGTGCTGCGAGGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTAATTGTTATGGCATCCACATGTGATGCCTGTGGTTATCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAAAAATTACACTTTCTGTGAAGAATGTTAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAACTTGATTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGCCTTGAGAGGGTCCATGGTTTTACTTTTGGGGATAGTCTCGAAGAAAATAGAAGAAGCAAGTGGATCGACTTTAAAGCAAGGCTAAACAAGCTTCTGAGCTTGGAAGAACCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTGAAAGAGGACAATCAATTAGCTTTTGAGGAGTACGAGAGGTCATGGGAACAAAATGAGGAATTAGGGCTGAATGATATGGACACTTCTTCTGCCGAATGTTTGGATATAAATG 1627 0.4468 MAENAKSEQIVDVGTVVEAVSADDGDAPLYSLESLCMRCGENVSFSLFLATACSSFNLSLNSASLSTWVDALHKQFGGGRGFCCQLLNVHIVVRGTMKYSLLVKFNRVVVVTLWISRQANRRIIQSYELNRPWKIPLVSFVKPFQTIPDLLQPPPGMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERKKVTPETAEAIDQFLVKLRSCATGESAFRFILDDPAGNSFIENPFAPSSDPSLSIKFYERTAEQQASLGYLVDSTQIEGTHGDALEGRDAVNTDQVGREPHGSIGATAGHRAIAQSNSAEIAESLFRYTAPEEVMTFPSSCGACAARCETRMFVTNIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKKITLSVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLERVHGFTFGDSLEENRRSKWIDFKARLNKLLSLEEPWTLILDDALANSFVAPATDDLKEDNQLAFEEYERSWEQNEELGLNDMDTSSAECLDIN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02309 542 SMART zpr1 126 252 IPR004457 GO:0008270
Spst3g02309 542 SMART zpr1 348 500 IPR004457 GO:0008270
Spst3g02309 542 Pfam ZPR1 zinc-finger domain 158 251 IPR004457 GO:0008270
Spst3g02309 542 Pfam ZPR1 zinc-finger domain 348 498 IPR004457 GO:0008270
Spst3g02309 542 Coils Coil 188 208 - -
Spst3g02309 542 Gene3D ZPR1, A/B domain 394 528 IPR042451 -
Spst3g02309 542 Gene3D ZPR1, A/B domain 153 279 IPR042451 -
Spst3g02309 542 FunFam Zinc finger protein ZPR1 394 528 - -
Spst3g02309 542 NCBIfam ZPR1 zinc finger domain 349 532 IPR004457 GO:0008270
Spst3g02309 542 Gene3D ZPR1, zinc finger domain 338 393 IPR042452 -
Spst3g02309 542 FunFam Zinc finger protein ZPR1 339 393 - -
Spst3g02309 542 PANTHER ZINC FINGER PROTEIN ZPR1 157 537 IPR040141 -
Spst3g02309 542 FunFam zinc finger protein ZPR1 151 279 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02309 6 537 C2H2 Transcription Factor Family AT5G22480 61.355 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02309 K06874 - gmx:100798741 688.337