Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02296 ATGGGTTGGGAAATTGTTCATCAGGAATCTACCAAAGATGCTGGAAGGCGCAGCAGATTGTGGGATCCTAAAGAAGTCTGTGATGTATTGAAAAATAACAGGGGAACTGAAGCAGTTGAAGGCATAATCTTAGATGTGTCTCAAATAAATGTCTTGCCGCTGAGCTATGAGACTTTTTCAAGGATGGTTAATATGAGATTTCTCAAATTCTATATGGGGAAGGGTAGGAAATGCAATTTGCACCTTCCTTCAGGTCTCGAATCAGTTCCTAATAAATTAGTGTACCTTCAATGGGATGGATACCCTTCCAAGTCTTTGCCATCAACTTTTTGTCCTGACAACCTTGTTGTGCTTTCCATGATGGAAAGCCATGTTGAGAAACTTTGGGATGGAATCAAGAGTCTTGCATGCTTGAAAGAGATCAACCTCCATGCCAGCAAAAACTTAATTAAACTCCCAGATTTATCTCAGGCACCAAATCTTGAAACTATAGATGTTTCTTATTGTACAAGTCTGCTTCATGTTCCCTTATCCATACAATGTGTCAAGAAGCTTCTTGTGTTTAACTTGGAATCCTGTAAGAGTCTCAAGAGTCTTCCAAGAAACATTCACTTGTCTTCTCTTGAAATGTTCATTCTCAGACGCTGTTCTAGTCTTGATGAATTTTCAGTAACTTCAAAGAACATGACACGCCTAGACTTGAGAGAAACAGCAATAACAGATTTCCCAGAATCTTTTTGGCAGCATCTGAACATGCTTGTTTACTTGAATCTGGAATCCTGCAACAAGCTCAAGAGTCTTATAAGCAATATTCACTTAAAATCTCTTCAAAGACTCAATCTGAGGGATTGTTCAATTCTTGAAGTGTTTTCTGTGACTTCAGAGAACATGGAATACTTGAATTTGAGAGGGACATCAATAAAAGAATTACCAATATCCGTTTGGCGCAATAACAAGCTTTTTACTTTGGTTCTTCATTCCTGTAAAAAACTACTGAATTTTCCTGAAAGACCAAAACTTGAGGATTTTCCTCTCATATCCTCCTCTGAAAGGCCAAATATGGATGAACGATGGACTTTGTCATCCTTGGCAGATTTATCACTGAAAGGAAGCAGTGTTGAGAATTTACCTGCAAGCATCAAAGATCTTCCTAGTCTGAAAAAACTTACCTTGACAGAGTGCAAACAGCTTCGGTCCTTACCAAGCCTTCCACCATCCTTGGAAGACTTATCCTTAGATGAAAGTAACATTGAGTGTTTACCTGTAAGTATCAAAGATCTTTCTCATTTGAGAAAACTTACCCTAATTAATCACAAGAAGCTTTTGTCTCCACAGGATCTTCCTCCATCTTTGAAAACTCCATTACTGAATGAAAGTAAAGTCGATCCACATCTTGTGAGCATGAAAGGTCTTTCTCAACTACAGAAGTTTCCTCAGGTTAAGGGGAAAAAGTTTCATTCTCTACCAGAGCTTCCACCATTCTTGGAAGAATTTTCACTAAGTGAGAGCAATATTGAGTGCATACCTGAAAGCATTAAAAATCTTTCACAACTGAGAAAACTAGCCTTAACAAAGTGCTCGAGGCTTCGGTATTTACCAGAGCTTCCACCAACTTTGGAAGATTTGTTTCTATGTGGATGTGATATTGAAAGCTTGCCAATAAGCATCAAAGATCTCGTTCATTTGCGAAAGATCACCTTAATTGAGTGCAAGAAGCTTAAAGCTCTACCAGAGCTCCCACAATACCTGCAATCGTTTTGTGCAGCTGACTGCAGATCACTTGAGATTGTTCAAAGTTCAAAGAATGTTTTAATAGAAGATAGATATGCATTCTATTGCAATTGCATAAACTTGGACCAAAAGTCACGCAACAATATCATTGCAGATGCACCCTTTGAGGAAGCTTTTATTTCTTTGCAAGAAAGGACACCTCTTGGTCCTCTTATTTCTATTTGCTTGCCAGGAAGTGAAATCCCAGACTGGTTCAGCTACCAATCAACAAATTCTTCACTGGACATGGAAATTCCTGTAGAGTGGTTCCTCGATTCAATGTTCTTAGGTTTTGCTCTGTGCCTTGTAATTGGTTGTTTCAAAAAGAACAGTTACGAAGGGTATGATCCAGATATCAATTGTTATCACTTTGTGAAATCTGCCTCTGACTCTGGCCCCAGTGTTCCATTTCTTGGCCATTGCACAACTGTAATGCAAGTTCCAAGAGGTTTTAATTCAGAACATATATTTATATGCTACTATCCTTCTTTTAATGCCTCCATACTGCAAGATTTCAAGGATTTAAGCTTGTACTATGATGCCGATAACTTAAGGCTCAGGGTCATCTTTAAATTCAAGGGTCCTTCTCAACGGTTGGACATTGTAAAGAAGTGTGGGGTCAGACCTCTGTTGATTGCTAATACTGAAAGGCTTCACATAGATAGTGAACTGCAACCTGAATAG 2454 0.3871 MGWEIVHQESTKDAGRRSRLWDPKEVCDVLKNNRGTEAVEGIILDVSQINVLPLSYETFSRMVNMRFLKFYMGKGRKCNLHLPSGLESVPNKLVYLQWDGYPSKSLPSTFCPDNLVVLSMMESHVEKLWDGIKSLACLKEINLHASKNLIKLPDLSQAPNLETIDVSYCTSLLHVPLSIQCVKKLLVFNLESCKSLKSLPRNIHLSSLEMFILRRCSSLDEFSVTSKNMTRLDLRETAITDFPESFWQHLNMLVYLNLESCNKLKSLISNIHLKSLQRLNLRDCSILEVFSVTSENMEYLNLRGTSIKELPISVWRNNKLFTLVLHSCKKLLNFPERPKLEDFPLISSSERPNMDERWTLSSLADLSLKGSSVENLPASIKDLPSLKKLTLTECKQLRSLPSLPPSLEDLSLDESNIECLPVSIKDLSHLRKLTLINHKKLLSPQDLPPSLKTPLLNESKVDPHLVSMKGLSQLQKFPQVKGKKFHSLPELPPFLEEFSLSESNIECIPESIKNLSQLRKLALTKCSRLRYLPELPPTLEDLFLCGCDIESLPISIKDLVHLRKITLIECKKLKALPELPQYLQSFCAADCRSLEIVQSSKNVLIEDRYAFYCNCINLDQKSRNNIIADAPFEEAFISLQERTPLGPLISICLPGSEIPDWFSYQSTNSSLDMEIPVEWFLDSMFLGFALCLVIGCFKKNSYEGYDPDINCYHFVKSASDSGPSVPFLGHCTTVMQVPRGFNSEHIFICYYPSFNASILQDFKDLSLYYDADNLRLRVIFKFKGPSQRLDIVKKCGVRPLLIANTERLHIDSELQPE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02296 817 SUPERFAMILY L domain-like 43 335 - -
Spst3g02296 817 FunFam Disease resistance protein RPS4 36 227 - -
Spst3g02296 817 Pfam Leucine Rich Repeat 114 133 IPR011713 -
Spst3g02296 817 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 294 IPR044974 GO:0006952
Spst3g02296 817 Pfam C-JID domain 653 798 IPR045344 -
Spst3g02296 817 SUPERFAMILY RNI-like 227 596 - -
Spst3g02296 817 Gene3D Ribonuclease Inhibitor 30 227 IPR032675 -
Spst3g02296 817 Gene3D Ribonuclease Inhibitor 228 406 IPR032675 -
Spst3g02296 817 Gene3D Ribonuclease Inhibitor 407 602 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02296 Spst-Chr3 66191488 66194117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02296 503 595 WRKY Transcription Factor Family AT4G12020 37.500 4.90e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02296 - - gmx:100797269 1367.83