Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02276 ATGGAGAACTTTCTGGGTCTTATCAAACTTCGTATCAAAAGAGGCACGAATCTCGTTGCTTGCGACACTCGTACCAGTGACCCCTATGTTTTTGTCACCATGGCTGAGCAGCAACTGAAAACTAGTGTTGTGAAAGATACCTGCAATCCTGAGTGGAATGAAGAATTGACACTTTATGTAAAAGATGTTAACATTCCAATACTTCTGACAGTTTCAGACAAAGACACTTTCACAGTTGATGACAACATGGGCGATGCAGAAATTGACTTAAAGCCATATCTTCAGTGTGTGAAGATGGAGTTGAGGGATCTCCCAGAGGGCCATGTAGTCAAGAATATTCAACCAGATAGGACTAACTGCCTTGCTGAAGAGAGTAGCTGCATATGGAAAAATGATAAACTCATCCAAGAGATGACTTTGAGATTGAGAAATGTCAAGTCTGGGGAAATAACTGTGGAAATTGGGTGGGTTACTCTTCCAGATTCAGAAGGCTTATCACAAGTTGAGTTTTAG 513 0.4113 MENFLGLIKLRIKRGTNLVACDTRTSDPYVFVTMAEQQLKTSVVKDTCNPEWNEELTLYVKDVNIPILLTVSDKDTFTVDDNMGDAEIDLKPYLQCVKMELRDLPEGHVVKNIQPDRTNCLAEESSCIWKNDKLIQEMTLRLRNVKSGEITVEIGWVTLPDSEGLSQVEF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02276 170 SMART C2_3c 7 102 IPR000008 -
Spst3g02276 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Spst3g02276 170 Gene3D C2 domain 5 168 IPR035892 -
Spst3g02276 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 162 IPR044562 -
Spst3g02276 170 Pfam C2 domain 7 92 IPR000008 -
Spst3g02276 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 101 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02276 Spst-Chr3 65789194 65790539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02276 38 167 C2H2 Transcription Factor Family AT1G70790 55.303 5.36e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02276 - - pvu:PHAVU_002G096400g 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02276 3 65789194 65790539 Spst3g02276 3 65789194 65790539 ECH
Spst3g02276 3 65789194 65790539 Spst4g02832 4 67990310 67992324 ECH
Spst3g02276 3 65789194 65790539 Spst1g02262 1 31260998 31262761 ECH