Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02259 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCAAGAAGGAGGGCGCGATTACTTCCAACAACAGCCTTCAACCTCTTCGTCTTCGTCTTCGTCTTCCATCCTTCAATCTCTCCCTCTCCATGTGCTTTTGCTCTCAATTACTGGCAATTTGACCGAGTTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATTCAAGAACTTCGAGAGAAAAAAAATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTAATATCAATGGGGAATTACCGTGATGGGGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATGCCCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAATGATACATTAATCCCCAAGTTTGACTATCAGCAAAAGAAGCGGGTTGGCTATAAAGCAATAAAGAGCGCTTCATCTGGGGTGGTAATAGTTGATGGCACATATGCATTACATGCAAAACTGCGGTCTCTACTGGATATTCGAGTTGCTGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCACTGTTTAGGAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTTCAGATGGACATTCAGGTTCGTCCTTTCGAGGAAATGAAGCCCAAACAGACAATTTTATCGAAATGTACCTTAGACCACCTTCATCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGAGACAGTCTGGAATTAGATATTATTTATCTCTTGGTGATCAGAGGATTGTTGACAAGAATTTCATTATAAGGCCTAAAGCTGAATTTGAGGTTGGTAGAATGACATTGGGTGGGTTGTTGGCTCTTGGGTACACAGTTGTGGTTAGTTATAAGCGTGCATCCACAACTGTCAATAATGGCAAGGTTACCATATCTTTTGAGACCATTGATGTTCTTGGTGAGACATTCATGGTGTTGAGAGGAACTAATAGAAAGACTGTTGGAACAGAGGCATCAAAGGTGGGTATTTATGGACCTTGGATTACTAAATCGTATCTGGAAATGATTCTTGAGAGAAAAGGTGTGCCTCGTCTTAGTACACCACCACTTGTATCTAATACAACTGTGGCTGGTAATCACGAAACAGCTATCATTGCACCAAAGCCAATTCGGGTTTCTCCTAACATTGTTACTGGGCTTGAGGATTTACCTCAGCCGTGGACTCGGTCCCCCACAAAATCTAAAATGGAACCTGTTGTGGCTACATGGCATTTCGTATCTTCCGATTCCTCCCAACTTGACAATTCAGTCCTAGATCCTTCATCTTTCAGGGATAGCATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTAGACAGGGGATTGCTTTTGGCAGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTGTCCCAGTCATTGTTGGAATTGATGGGGAGGGAGAAACTGGATGGGGGACAGTCTCAAAGCATGCGTTTTTCACAGATGTAATTCTGATAGAATCACTAATCCTGGCGACGTCGTGTTTTTCAGGAGGTCCAAGCGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAAAAAGTAAAGGATTTTAAATATGATGACTTCAGTGCACTTGATTTATCATTGCTATCGAAGAACATTGATGACATAAGAAATGGTCAAAGAACAAAAATACCTATATTTGACTTGGAAAGCGGTGGTCGGAGTGGTTTCAAGGAACTTGAAGTTTCGGAAGATTGTGGAGTGCTTTCAGGCTATCATGCTATGCTAAAAGTGCCTCTTCAGAATGAAATCACTATTGATCTGATTATATTTGAAGGCGTCTTTGCGTTGCATCCTGATATCCGAATATCACTTGACTTGTGGATTGCTGTTGTTGGAGGCGTTCATTCACATTTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGCTTTATTTCCCAAAATGAGATAATGATGACAGTGTTTCCCATGTTTCAGCAGCTTATTGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGATTTTGACCCTGTGTTTTCTCCTGAGAGTTCGTTATTTGTATTAAAAAGTAACAAAAAAGTAGCATATCAAGATGTTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTTATTGATATTTATATAAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGACAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCATTGCTGATACGAGAGCCTATCAAAGAAGGGAACTTTATCATTCAGCCTAAAGTGGATTTTGATATCAGCATTAGTACGGTTGCTGGCCTTCTTAATCTTGGGTGA 2589 0.4005 MDDEVVQRVFQEGGRDYFQQQPSTSSSSSSSSILQSLPLHVLLLSITGNLTELSFDHGYYLLVKSIQELREKKNGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMGNYRDGVDEGNDVDSIDFDALIKNLEDLTKGNDTLIPKFDYQQKKRVGYKAIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESSDGHSGSSFRGNEAQTDNFIEMYLRPPSSSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVTISFETIDVLGETFMVLRGTNRKTVGTEASKVGIYGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGNHETAIIAPKPIRVSPNIVTGLEDLPQPWTRSPTKSKMEPVVATWHFVSSDSSQLDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGVPVIVGIDGEGETGWGTVSKHAFFTDVILIESLILATSCFSGGPSGSGKTSLAHKMANIIGCEVVSLESYYKKVKDFKYDDFSALDLSLLSKNIDDIRNGQRTKIPIFDLESGGRSGFKELEVSEDCGVLSGYHAMLKVPLQNEITIDLIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVFSPESSLFVLKSNKKVAYQDVVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLG 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02259 862 PANTHER URIDINE KINASE 569 847 - -
Spst3g02259 862 CDD UMPK_like 78 240 - -
Spst3g02259 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 190 IPR027417 -
Spst3g02259 862 Gene3D - 571 761 IPR027417 -
Spst3g02259 862 Gene3D - 77 257 IPR027417 -
Spst3g02259 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 572 755 IPR027417 -
Spst3g02259 862 SMART AAA_5 75 225 IPR003593 GO:0016887
Spst3g02259 862 SMART AAA_5 563 728 IPR003593 GO:0016887
Spst3g02259 862 Pfam Phosphoribulokinase / Uridine kinase family 572 752 IPR006083 GO:0005524|GO:0016301
Spst3g02259 862 Pfam Phosphoribulokinase / Uridine kinase family 79 237 IPR006083 GO:0005524|GO:0016301
Spst3g02259 862 CDD UMPK_like 571 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02259 Spst-Chr3 65481158 65493677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02259 67 237 PRT Gene Family AT1G55810 22.513 2.28e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02259 - - gmx:100778905 1406.35