Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02237 GGTGCAGGGCAGGCAGTGACACTCAGAGTAACAGCAGATCGTTGTGCTTTCTATAATTGCAGGTTCCTTGGGTGGCAGGACACACTGTACTTACATTATGGAAAGCAATACTTGAAAGATTGTTACATTGAAGGGAGTGTGGACTTCATTTTTGGTAATAGTACTGCACTCTTGGAACATTGTCACATCCATTGCAAGTCCGCAGGGTTTATAACTGCACAGAGCAGAAACTCTCCACAGGAAAAAACTGGTTATGTATTCCTGAGATGTGTTGTCACAGGTAATGGGGGAACTTCATATGCATATCTGGGAAGACCATGGAGACCTTTTGCAAGAGTGGTTTTTGCATTCACTTTCATGGATCAATGTATAAAGCCTGCAGGGTGGAATAATTGGGGCAAA 402 0.4328 GAGQAVTLRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRNSPQEKTGYVFLRCVVTGNGGTSYAYLGRPWRPFARVVFAFTFMDQCIKPAGWNNWGK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02237 134 Pfam Pectinesterase 3 132 IPR000070 GO:0030599|GO:0042545
Spst3g02237 134 SUPERFAMILY Pectin lyase-like 3 133 IPR011050 -
Spst3g02237 134 ProSitePatterns Pectinesterase signature 2. 43 52 IPR033131 -
Spst3g02237 134 Gene3D - 1 134 IPR012334 -
Spst3g02237 134 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02237 Spst-Chr3 64270660 64271958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02237 4 132 Carbohydrate Esterase AT3G05610 41.429 1.06e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02237 K01051 - gmx:100810259 286.189