Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02233 ATGGAAAGAACAACCAAAACCATTTTCGCTTCCTTTTTACTCTGCACTCTCCTACTTCACCTTCATCTTTCCAAAGGGGTAGCACAAGAGGTGGCAAAATCCGAAAGCGAAGCATTAGGGGAGCCAGAGAAAAGAGAAGCACTTGAAATCATCATAGGTGGTGGAGGTTCCCCTGCTCCCTCCCCTGCTTCCCCTGAATCTCCATGCCCCCCTCCCCCACCCAAACAGCTTTCTCGTTTAGAGAAAGCTCGTCGCGTGCTTCTCAAATTCAAATCCCTCATCGATGACCCAACATGTTACACGCAAAACTGGAACGAGAACACCGGCACATGCGACTTCAGGGGTGTACGATGCGCCACATATCCGAACACATCAGAGAAAGCAGTTGCAGGATTGGACTTGAACGGAGCAAGAGTGAAGGGTCTAAACGGCTGCGATTTGCCCCTCTCAACTCTCTTGGGTGAGAAGCAAATACCGGAGTTGACATTCTTCCACGTCAACTCCAACGGCTTCGCCGGCTTCGTCCCCAACGAAATCACGCGTCTCCCTTTCTTCTTCGAGCTCGACCTCAGTAACAACAAAATCAATGGCCAGTTTCCCCTGGACGCGCTCCAGTCAAACCTACTGGTCTTCCTGGACCTCCGCTTCAACCAACTCACCGGTCCAATTCCCTCCCAACTCTTCGAGAAGGACCTCGATGTCATTTTCATAAACAACAACCAATTCACTCAGGGCCTCCCGGAGAATTTCGGGTCCACACCGGCTCGCTACCTGACTTTCGCCAACAACAACCTCACCGGCCCCATTCCCAAGAGCGTCGGTCACGCACCCAACCTCACCGAAGTTCTCTTCTCCGGCAACAAGTTCGATGGCTGCTTGCCCTTTGAAATTGGAAACCTCAAAAGAGCTGTGGTCTTTGACGTGAGTAACAATTCACTCACCGGCCCCATCCCTCTCTCCTTCGGGTGCTTGAAGAGCATTCAGTATCTCAATTTGGCGCACAACAAATTCTACGGATGTGTTCCCGACAATGTTTGTCAAATTTCTTCTCTCCGCAACAATGGTAATCTCTCCCTGGCCAACAATTACTTCAACGAGATTGGCCCGTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCCAACAATTGCATCCCGGGGCTCCCAAAACAAAGGTCTTCCAAAGAATGCTATGACTTTTACAAGACGAAGAAGGCGTGTCCGAATCCGAGTTCTCTCTACTACGTGCCGTGCAAATCGCACTGGGGAAAACCCAGTTCCGAAGTCACTGGTCCTCCTACTGAGCCGGTGACTTACAAGACTCTCAAACCCCATCGTCTGAGATTGTGA 1356 0.5066 MERTTKTIFASFLLCTLLLHLHLSKGVAQEVAKSESEALGEPEKREALEIIIGGGGSPAPSPASPESPCPPPPPKQLSRLEKARRVLLKFKSLIDDPTCYTQNWNENTGTCDFRGVRCATYPNTSEKAVAGLDLNGARVKGLNGCDLPLSTLLGEKQIPELTFFHVNSNGFAGFVPNEITRLPFFFELDLSNNKINGQFPLDALQSNLLVFLDLRFNQLTGPIPSQLFEKDLDVIFINNNQFTQGLPENFGSTPARYLTFANNNLTGPIPKSVGHAPNLTEVLFSGNKFDGCLPFEIGNLKRAVVFDVSNNSLTGPIPLSFGCLKSIQYLNLAHNKFYGCVPDNVCQISSLRNNGNLSLANNYFNEIGPSCWSLIKSKVLDVSNNCIPGLPKQRSSKECYDFYKTKKACPNPSSLYYVPCKSHWGKPSSEVTGPPTEPVTYKTLKPHRLRL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02233 451 SUPERFAMILY L domain-like 82 387 - -
Spst3g02233 451 MobiDBLite consensus disorder prediction 61 76 - -
Spst3g02233 451 MobiDBLite consensus disorder prediction 52 76 - -
Spst3g02233 451 FunFam Leucine-rich repeat receptor protein kinase EMS1 246 344 - -
Spst3g02233 451 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 430 - -
Spst3g02233 451 Gene3D Ribonuclease Inhibitor 255 407 IPR032675 -
Spst3g02233 451 Gene3D Ribonuclease Inhibitor 80 254 IPR032675 -
Spst3g02233 451 Pfam Leucine rich repeat N-terminal domain 83 118 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02233 Spst-Chr3 63147133 63148488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02233 79 399 Trihelix Transcription Factor Family AT1G12040 41.896 4.90e-75 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02233 - - ccaj:109818312 649.432