Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02227 ATGATTTTATCTAAGCAATCTTCAGTTTCAATTTCAACACTCCACACTTTAACATTTTTTCTATCCCTTCTCTTAGTAGATTGCCAAATCCTTGAGACCCCATCACCACCACCACCCGATTCAATCCCACTAATCCCTGACCTTTTAAACTTCTTAGACCAGAGGGTGGCTCTGGTCTTCCCCATTGTTCAAACCTTCAAGAACACAATAACCTCAGACCCTTTAGGAATAACAACAACATGGGTTGGTCCAAATATATGCAACTACACAGGCTTCTACTGTGATAACCCACCAGACAACCTCACTGCCACAACCATTGCCTCAATTGATTTCAACGGCTTTCAACTGACCGCTCCAACACTTGATGGCTTCATCGACCAACTCCCTGACTTGGCTCTTTTCCATGCAAACAGCAACAAATTTTCGGGCACCGTATCACCAAAAATAGCAGGGCTCAAGTTCCTATACGAACTTGATTTAAGTAATAACTTGTTCTCCGGGGTATTCCCCACATCGGTAATCAACATCCCCACCTTGTCCTTTTTGGACATTAGGTACAACCTTTTCACTGGCACAGTGCCCCCACAAATTTTCATGCAAACATTAGACGTTCTTTTCCTCAACAACAACAACTTCATGCTCACACTGCCCAACAACCTAGGAGACACACCCGTCGTTTATCTCACGTTGGCCAACAACAAATTCACCGGCCCCATTCCCCGCAGCATTAGAAAAGCCTCGCCCACGTTGATCGAAGTGCTGCTTTTGAACAACCTTCTGACGGGTTGTCTTCCCTACGAAATCGGGTTCTTGGGAAACGTGACATTGTTCGATGTTGGTGGAAACCTCTTAACTGGGCCAATACCTTGGTCCTTTGGGTGCTTGAAGAAAGTGGAGCAGCTGAACCTGTCAAACAACTTTTTGTATGGACAGGTTCCGGAAGTGGTGTGTGCGCTGGGGAATTTGGCGAATCTTTCCTTGTCTTACAATTATTTTACGAAAGTGGGACCTTTGTGCAAGAGGCTGATTCAAAGAGGGGTTCTTGATGTGAGGAAGAACTGTATTATTGGTCTTCCGGATCAGAGACCAGCGAAGGAGTGCATGGCGTTTTTCTTAATTCCGAGGTCTTGTTTGCACCCTGCGTCTTTTAATATGATACCCTGTCAAATTCATTGGACGAAACCGCAAGAGAAAACTGAGAGGCATTTGCTTTCATATTCTGCACTTTCCAGAAATAGAGTGGTTTTCTGA 1251 0.4468 MILSKQSSVSISTLHTLTFFLSLLLVDCQILETPSPPPPDSIPLIPDLLNFLDQRVALVFPIVQTFKNTITSDPLGITTTWVGPNICNYTGFYCDNPPDNLTATTIASIDFNGFQLTAPTLDGFIDQLPDLALFHANSNKFSGTVSPKIAGLKFLYELDLSNNLFSGVFPTSVINIPTLSFLDIRYNLFTGTVPPQIFMQTLDVLFLNNNNFMLTLPNNLGDTPVVYLTLANNKFTGPIPRSIRKASPTLIEVLLLNNLLTGCLPYEIGFLGNVTLFDVGGNLLTGPIPWSFGCLKKVEQLNLSNNFLYGQVPEVVCALGNLANLSLSYNYFTKVGPLCKRLIQRGVLDVRKNCIIGLPDQRPAKECMAFFLIPRSCLHPASFNMIPCQIHWTKPQEKTERHLLSYSALSRNRVVF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02227 416 Gene3D Ribonuclease Inhibitor 224 414 IPR032675 -
Spst3g02227 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 394 - -
Spst3g02227 416 Gene3D Ribonuclease Inhibitor 62 223 IPR032675 -
Spst3g02227 416 SUPERFAMILY L domain-like 67 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02227 Spst-Chr3 62802878 62804128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02227 40 374 Leucine-rich Repeat extension Gene Families AT3G24480 45.970 1.52e-96 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02227 - - gmx:100813314 684.485