Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02209 ATGACGCAGGGGCAAGAGCTGGAACAGGTGCAATGCTTCGGTCGCAAGAAGACCGCCGTGGCTGTAACCTACTGTAAGCGCGGGCGCGGCCTCATCAAGATCAACGGCTGCCCCATCGAGCTCGTCGAACCCGAAATCCTCCGGTTCAAGGCCTTCGAGCCGATCCTCCTCCTCGGGAAAAGCCGGTTCGCAGGCGTGGACATGAGAATCCGCGTCAAGGGCGGTGGCCACACCTCCCAGATATACGCCATTCGCCAGAGCATAGCCAAGGCCCTCGTCGCTTTCTACCAGAAATATGTCGACGAACAGAGCAAGAAGGAAATCAAGGATATCCTCGTACGCTATGATCGCACGTTGCTTGTCGCGGATCCCAGGCGCTGCGAGCCTAAGAAGTTTGGTGGTCGCGGTGCGCGCGCCAGATTCCAGAAGTCTTACCGTTGA 441 0.5828 MTQGQELEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02209 146 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 146 IPR020568 -
Spst3g02209 146 PANTHER RIBOSOMAL PROTEIN S9 5 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Spst3g02209 146 Pfam Ribosomal protein S9/S16 14 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Spst3g02209 146 Gene3D - 2 146 IPR014721 -
Spst3g02209 146 ProSitePatterns Ribosomal protein S9 signature. 74 92 IPR020574 GO:0003735|GO:0005840|GO:0006412
Spst3g02209 146 FunFam 40S ribosomal protein S16 2 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02209 Spst-Chr3 61895499 61895939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02209 1 146 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.301 5.10e-92 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02209 K02960 - gmx:100812117 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02209 3 61895499 61895939 Spst3g02209 3 61895499 61895939 ECH