Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02208 ATGGTAAACTTCTTCACCATGAAGAATGTTTGTCACTTGAGTCGATGCATCCATTTGGAGAATCCTGATTTCATGATTATTACAAGGATAAAGAACCGACATGGAACCTCCTCATTGTATTGCAAAAATCTCACCTACCCCGGACCGGACGCCAAATGGTTCAACCAAACACCTTACTCTTTTCCATTCACCGACCCGGTTCGAACCGGCCTTTTTCTTCATTATATTAACCATCCTTCGGCACCCACACCTCGTCAAGTTCCTATTAACCCATCAACCATCCGAAAGGAGAAAGAAAAGGCACCAAAAATTATACCAATGGCAAACAACGGTGAAAAAAACCAAACTGAAGCTGGAAGGCACCAAGAGGTTGGTCACAAGAGCCTTCTCCAGAGTGATGCTCTTTACCAGTATATTCTGGAGACCAGTGTCTACCCAAGAGAACCTGAACCCATGAAAGAATTGAGAGAGTTGACTGCTAAGCACCCATGGAACATCATGACTACCTCTGCAGACGAAGGACAATTCTTGAACATGCTTCTTAAGCTTATCAATGCCAAGAATACCATGGAGATTGGTGTCTACACTGGGTATTCACTGCTTGCCACCGCCCTCGCTCTTCCTGAAGATGGAAAGATCTTGGCCATGGATATTAACAGGGAGAATTACGAGCTGGGTTTGCCTGTCATTAAAAAAGCTGGTGTTGACCACAAAATTGAATTCAGAGAAGGTCCTGCTCTTCCGGTTCTCGATGAAATGGTTAAAGATGAGAAGAACCATGGGAGCTATGATTTCATCTTTGTGGATGCGGACAAGGACAACTACCTCAATTATCACAAGAGGTTGATTGAGCTTGTCAAAGTTGGAGGCTTGATCGGGTACGACAACACCCTATGGAACGGTTCTGTGGTGGCACCCCCTGATGCTCCTCTCAGGAAGTATGTTAGGTACTACAGAGACTTCGTGTTGGAGCTCAACAAGGCCTTGGCTGTGGACCCCAGAATCGAAATCTGCATGCTTCCGGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAAGTGA 1062 0.4557 MVNFFTMKNVCHLSRCIHLENPDFMIITRIKNRHGTSSLYCKNLTYPGPDAKWFNQTPYSFPFTDPVRTGLFLHYINHPSAPTPRQVPINPSTIRKEKEKAPKIIPMANNGEKNQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIKKAGVDHKIEFREGPALPVLDEMVKDEKNHGSYDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02208 353 PANTHER O-METHYLTRANSFERASE-RELATED 125 352 - -
Spst3g02208 353 Gene3D Vaccinia Virus protein VP39 127 353 IPR029063 -
Spst3g02208 353 Pfam O-methyltransferase 141 352 IPR002935 GO:0008171
Spst3g02208 353 FunFam Caffeoyl-CoA O-methyltransferase 1 121 353 - -
Spst3g02208 353 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 128 352 IPR002935 GO:0008171
Spst3g02208 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 351 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02208 Spst-Chr3 61881827 61888555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02208 110 352 Monolignol Biosynthesis Gene Families AT4G34050 88.934 6.38e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02208 K00588 - gmx:100811247 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02208 3 61881827 61888555 Spst3g02208 3 61881827 61888555 ECH