Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02199 ATGTTGACCTTAGTCATAAAAAGAGAAGAGACTGAGGAAGGATCGATTCACTCTAAGGATAAGAATTGCCCTTTGAATTTTACTCGTTCAAACTTCACACTGGCATCCTCTCTATGCTCTGACCATGGTGACCGAGGAAAATGCTGCCGCTACATTAATACTAACGTCGCAATTGCTGTTTCTCGTTTTGCTAATGCAACAGGAAACCTAGGGGTCCCTCAAAATGCATCTGACATCTGCCTCCAAACCATATTTCAAACCATGCAACTTAATGGAGTTGCACAAAATGCAACAGCTTTCTGTGGTTTCGGAACAAAAATTCCTGTTAATTATGAATGCAAGGGGCGAACAAGTGTTGTCCAAATGCTGCAATCCCCCAGATTTACAGAAGTCACTAAAAATTGCATAGCACCACTTGGAGAGGAAAGTAAATGTAAGAAGTGCTTAAATGCCGGCATTGGTTATCTGCATCATATCGGAATTGAAGATAATATAACACTAAGTACGTGTCGTGATGCCACTTTTGCTGCACTAGCAAGCCAAGTTGATGAGATATCTACAATTGACATTGCAATTTGTTTCTTTGGGGTTCAAGGACTTCTCAATATCCCTGTTTCAGAGTCATCCTCCTTGCCTGCTCCGAAGGCTTCTCCAAGGCCACCGATTGCTGATGGCCCAAGTCAACCATTGTTAAGTGCACCTTTAAAGGGAAACCACCATTCATATCATTTGACATTAGTTCCAGGTATTGCTATTGCAGTTACAGCTGTTGCTGTTATCACACTCATAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGAGCTAGACGAGCCAGATAATTTTGGTAAACCCTGTTCAAAAACCTTACCTCCTTGTGCAACATGGAAATTTCAGGAAGGTTCTTCATCTATGTTCCGAAAATTCAGCTACAAGGAGATAAAAAAGGCAACAGAGGATTTTCACACTATCATTGGTCAAGGGGGATTTGGAACTGTATATAAAGCGAATTTTTCTGATGGCGTGGTTGCAGCAGTTAAACGGATGGACAGGATCTCTGAGCAGGGGGAGGAGGAGTTCTGCAGAGAAATTGAGCTTCTTGCCCGGCTGCACCATCGGCATCTTGTTGCCTTAAGAGGCTTTTGCATTAAAAAACGTGAGAGGTTTCTATTGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATACCCCTGGTAAAACACCTTTAAGTTGGCGGACAAGAATCCAAATTGCCATTGATGTGGCCAATGCACTGGAGTATCTCCATTTCTATTGTGATCCTCCTTTGTGTCACAGAGATATTAAATCTAGCAACACTTTGTTGGATGAGAACTTTGTCGCCAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAACCGATGGATCAGTATGCTTTGAACCTGTAAACACTGAAATCCGGGGAACTCCAGGTTATATGGATCCTGAATATGTTGTTACTCAAGAGCTCACCGACAAAAGTGACATCTACAGTTTTGGGGTGTTACTACTTGAAATTGTAACAGGAAGACGAGCCATTCAAGATAATAAGAATCTAGTAGAATGGGCTCAACCATTCATGGAATCAGATACGAGATTATTGGAGCTAGTAGATCCCAACGTGAGGGAATCTTTTGACTTGGATCAGCTCCAAACAGTAATATCTATAGTAGTATGGTGCACCCAGAGAGAAGGAAGAGCAAGGCCTTCAATAAAACAGGTACTTAGGCTTCTGTATGAGACATCAGAACCCATGCACAGTGATTTTCTACAAGCTGTCGAAGATGAAGAATGTCAGGGAAGTCAGCATAGAGGCAGAAGAAGCAAGGGGAAAATGCTCAGAAATGAGGCATTGTTTCACAGCGGAGAGGGAAGATATCTTGCTTCATCTTCGAGTACATCCCGGTCATATTGCAGTAGAAGTTTTTTACTGGAGACTGGCTCTCCACAGTCTCCGCCGAATATGTTCTCTGTCTGA 2004 0.4232 MLTLVIKREETEEGSIHSKDKNCPLNFTRSNFTLASSLCSDHGDRGKCCRYINTNVAIAVSRFANATGNLGVPQNASDICLQTIFQTMQLNGVAQNATAFCGFGTKIPVNYECKGRTSVVQMLQSPRFTEVTKNCIAPLGEESKCKKCLNAGIGYLHHIGIEDNITLSTCRDATFAALASQVDEISTIDIAICFFGVQGLLNIPVSESSSLPAPKASPRPPIADGPSQPLLSAPLKGNHHSYHLTLVPGIAIAVTAVAVITLIVLIVLIRQKSRELDEPDNFGKPCSKTLPPCATWKFQEGSSSMFRKFSYKEIKKATEDFHTIIGQGGFGTVYKANFSDGVVAAVKRMDRISEQGEEEFCREIELLARLHHRHLVALRGFCIKKRERFLLYEYMGNGSLKDHLHTPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASTDGSVCFEPVNTEIRGTPGYMDPEYVVTQELTDKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPFMESDTRLLELVDPNVRESFDLDQLQTVISIVVWCTQREGRARPSIKQVLRLLYETSEPMHSDFLQAVEDEECQGSQHRGRRSKGKMLRNEALFHSGEGRYLASSSSTSRSYCSRSFLLETGSPQSPPNMFSV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02199 667 FunFam Putative receptor-like protein kinase 395 595 - -
Spst3g02199 667 SMART serkin_6 319 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02199 667 ProSiteProfiles Protein kinase domain profile. 319 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02199 667 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Spst3g02199 667 Gene3D Transferase(Phosphotransferase) domain 1 395 610 - -
Spst3g02199 667 Pfam SPARK 19 159 IPR043891 -
Spst3g02199 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Spst3g02199 667 FunFam Putative receptor-like protein kinase 287 394 - -
Spst3g02199 667 SUPERFAMILY Protein kinase-like (PK-like) 301 590 IPR011009 -
Spst3g02199 667 Pfam Protein kinase domain 323 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g02199 667 Gene3D Phosphorylase Kinase; domain 1 294 394 - -
Spst3g02199 667 MobiDBLite consensus disorder prediction 211 230 - -
Spst3g02199 667 CDD STKc_IRAK 325 587 - -
Spst3g02199 667 PANTHER OS01G0750732 PROTEIN 165 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02199 Spst-Chr3 61538969 61543579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02199 20 666 Receptor kinase-like Gene Family AT3G19300 59.754 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Spst3g02199 Pkinase 8.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02199 - - gmx:100809641 1183.32