Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02191 ATGAACTTCAGGAACTACGGTGATAATAACCCCACTTGGGATGCCATGCATGGGAAGACACCAGCAAATGTTAATTCTCTGCTGAGACAGCCCTCAGTATACTCCCTTACGTTTGATGAGTTTCAGAGCACCATGGGTGGGATTGGGAAGGAATTTGGGTCCATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCCTTGGCATTTTCTGCTAGTGCAGGAGAAGGCCACAACCATAACCCAATTATTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGGACCAAAGATGGGAACGGTAGCAATGGTGGTTCATCCATTCCTCAAAGGCAACCAACATTGGGAGAAATAACTTTGGAGGAGTTTTTGGTGAGAGCTGGGGTGGTGAGAGAAGATGTACCTCAACAACAAATTGGAAAACCAGATAACAATGGATGGTTTGGTGACTTTCCTAGACCAAACAATAACACTGGCCTACTTCTTGGGTTCCAACAACCAAATAGAAGTAACGGGAATATTAGTGAGAGGGTGCTGGAGAGCAACAATAACTTAGTCTCCAAACAACCTCCTCCTTTATCACTAAACTCAAACCACTCTCAACGACCAACACAACAGCCACCACCACTTTTTCCAAAGCCAGCAAATGTAGCTTTTGCTGCTCCTATGCATTTGTTGAACAGTGCTCCACTTGCTAGCCCTGGTAGAAGAGGAGGCTTGATTGAGCGTTCATTGAATGTTGGAATGATTGGTTTAGCCTCGGCAAATCCAGGGGCTTCTCCCTCAAAGAAAATATCGCCGGATGTAATTACAAGAACTAACGTAGAAAACTCTTCCCTGTCACCAGTTCATTATGCAATCAACAGGGGAAGAAAATGCAGTGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCAAGGTCACGAGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAAGTTGCAAAACTTAAGGAAATAAACAGAGAATTACAAAGAAAACAGGCAGAAATTAAGGAAATGCAGAAGAATAAGGATTTGGACCCTGCATGCCGGCCAAGGATAAGTAAAATACAATGCTTGAGAAGGACACTTACAGGACCATGGTAG 1224 0.4371 MNFRNYGDNNPTWDAMHGKTPANVNSLLRQPSVYSLTFDEFQSTMGGIGKEFGSMNMDELLKNIWTAEETQALAFSASAGEGHNHNPIIGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGTKDGNGSNGGSSIPQRQPTLGEITLEEFLVRAGVVREDVPQQQIGKPDNNGWFGDFPRPNNNTGLLLGFQQPNRSNGNISERVLESNNNLVSKQPPPLSLNSNHSQRPTQQPPPLFPKPANVAFAAPMHLLNSAPLASPGRRGGLIERSLNVGMIGLASANPGASPSKKISPDVITRTNVENSSLSPVHYAINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQRKQAEIKEMQKNKDLDPACRPRISKIQCLRRTLTGPW 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02191 407 SMART brlzneu 325 389 IPR004827 GO:0003700|GO:0006355
Spst3g02191 407 MobiDBLite consensus disorder prediction 211 240 - -
Spst3g02191 407 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 332 347 IPR004827 GO:0003700|GO:0006355
Spst3g02191 407 CDD bZIP_plant_BZIP46 329 383 - -
Spst3g02191 407 MobiDBLite consensus disorder prediction 118 142 - -
Spst3g02191 407 MobiDBLite consensus disorder prediction 211 231 - -
Spst3g02191 407 Pfam bZIP transcription factor 329 382 IPR004827 GO:0003700|GO:0006355
Spst3g02191 407 SUPERFAMILY Leucine zipper domain 329 377 IPR046347 GO:0003700|GO:0006355
Spst3g02191 407 MobiDBLite consensus disorder prediction 123 141 - -
Spst3g02191 407 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 327 378 IPR004827 GO:0003700|GO:0006355
Spst3g02191 407 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 407 IPR043452 GO:0003700|GO:0045893
Spst3g02191 407 Coils Coil 352 382 - -
Spst3g02191 407 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 327 384 - -
Spst3g02191 407 Gene3D - 327 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02191 Spst-Chr3 61454327 61456460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02191 19 407 bZIP Transcription Factor Family AT3G19290 48.605 2.39e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst3g02191 bZIP_1 2.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02191 K14432 - gmx:100776600 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02191 3 61454327 61456460 Spst3g02191 3 61454327 61456460 ECH