Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02188 ATGGGTCTCGTGATGAATCTGCGAGGCTCGAGAACAGAGGGTGCCCAACAAGAAAGCTTACCCCTTTCGGGTCCGGGTGGCAACCCAAAGAGGAAATGGAGTAATCTAATGCCTCTTATTGTGGCCTTTGTGGTCATTGCGGAGATCGCGTTTCTGGGTAAGTTGGATATGGCCAAAAACGCCGCCATGGTTGACACCCTCGCTGACTTGTTCTACCGCTCTCGTACGGTCGTTGAAGGTGACGATTTGGGGTTGGGTGCGGTGACTGGTGATCGGATTTCTGAAGCGGATAGTTGTGAGAAATGGTTGGAGAGGGAAGATGCTGTCACGTATTCGAGGGACTTTTCCAAAGAGCCTGTTTTTGTTTCTGGAGCTGACCAGGAGTGGAAGTCTTGTTCAGTTGGATGCAAATTTGGGTTTACTGGGGATAAGAAACCTGATGCTGCATTTGGGTCACCTCATCCAAGTGGAACAGCTAGTGTTCTGCGATCAATGGAATCAGCAGAATACTATGCTGAGAACAATCTTGCCATGGCAAGACGGTGGTATGATATGATGGCACCAGTGCAGCCAAAAACTGAAGCTGCTCTAGCAGCTGCATTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAGGCCCTTGAAAAATCAAATATAAAGATTGATTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGTGAACAAAGTGGAAGCTCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAATGAGGAAGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGAATTTGCTCCATCTCCTGGTTCAATTTTACATATTAAAGTGATAGAAGATGTTGAGTCAGTTGCAAAGACCATGAAATACCTAGCAGAGAATCCCGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGTCCATCTGATTCCTTCAAGGCTCTTGTGGATATGGCAGCTGTACATTCATCCTGCCGCCTTTGCATTCACTTGGCCACAGTGAGTAGAGAGAAGGAAGAAAATAGTCCAAGCTTTAAGAAACGTCCCTGCAAGTGCACTAGAGGACCAGAAACTGTGTATCATATCTATGTGAGAGAAAGGGGAAGGTTTGACATGGAGTCCATTTACCTCAGGTCTAGCAATTTAACCCTGGATGCCCTGAAGGCTGCTGTTGTTTTGAAGTTCACATCCCTGAATCATGTACCTGTGTGGAAGACTGAAAGGCCTGAAGTTATAAGAGGGGGCAATGATTTAAAACTCTACAAAGTATACCCACTTGGGTTGACACAGAGACAAGCTCTTTATACCTTCAGCTTCAAAGGGGATGCTGATTTCAGGAGTCACTTAGAAAGCAATCCTTGTGCCAAGTTTGAAGTCATTTTTGTGTAG 1461 0.4483 MGLVMNLRGSRTEGAQQESLPLSGPGGNPKRKWSNLMPLIVAFVVIAEIAFLGKLDMAKNAAMVDTLADLFYRSRTVVEGDDLGLGAVTGDRISEADSCEKWLEREDAVTYSRDFSKEPVFVSGADQEWKSCSVGCKFGFTGDKKPDAAFGSPHPSGTASVLRSMESAEYYAENNLAMARRWYDMMAPVQPKTEAALAAAFISNCGARNFRLQALEALEKSNIKIDSYGGCHRNRDGRVNKVEALKHYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQEFAPSPGSILHIKVIEDVESVAKTMKYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATVSREKEENSPSFKKRPCKCTRGPETVYHIYVRERGRFDMESIYLRSSNLTLDALKAAVVLKFTSLNHVPVWKTERPEVIRGGNDLKLYKVYPLGLTQRQALYTFSFKGDADFRSHLESNPCAKFEVIFV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02188 486 MobiDBLite consensus disorder prediction 1 28 - -
Spst3g02188 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 107 360 - -
Spst3g02188 486 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 166 335 - -
Spst3g02188 486 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 196 362 IPR001503 GO:0006486|GO:0008417|GO:0016020
Spst3g02188 486 Gene3D - 159 335 IPR038577 -
Spst3g02188 486 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 101 436 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02188 1 486 Xyloglucan Fucosyltransferase1 AT3G19280 62.863 0.0 663
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02188 3 61109742 61115115 Spst3g02188 3 61109742 61115115 ECH