Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02166 ATGATAAGGTGCTCAATCTTGAGTGGATACAGACCACTGCCAACGAAATATCATCTTCACGTTCCAACAAAACCAAACTTCCAATCAGTGACCAATTTGAGTAGCCATTATCTCCTTCCATCCTTTCCCATTAAAGCTTGTAATCCTCTTCCATTTTCTTCTCACAAACTCGAAAAACCTTTACACTCATCTACCACCATGGATAATTCGACCTCCACAGACAGTGAAGTAGCCTATGATATCCCTCCCATCCTCAAAGTCTACAAAAACGGTCGTGTCGAGAGGCTAGAGGGTGTCCAGGTTGTTCCTCCGGGGCTTCATCCTGAAACCAACGTCGAATCCAAAGACGTCGTAATCTCCGAAGAACATGGCATATCCGCGAGGCTTTACATTCCCAAAACCACTTACCCCCCACGGAATAAACTCCCTCTCCTTGTTTACTTCCACGGCGGCGCCTTCATCATCGAAACACCTTTTTCTCCTAACTACCATAACCTCCTCAACAACATTGTTTCAGAGGCTAATGTGATAGGTGTCTCTGTCCACTACAGGAGAGCACCGGAGCACCCGGTTCCGGCTGCCCACGAAGACTCGTGGGTTGCTCTCAAATGGGTCGCTTCCCATTCTGGGGGAACCGGCTCTGAGGAGTGGCTAAACGAGCACGCAGATTTTGGGAAAGTTTTCTTCGCCGGTGACAGTGCCGGAGCCAACATTGCAAGTTATTTGGGCATTCGTCTTGGGACGGAAGGGCTGCCCAGGGTGAAGGTTGAAGGGATTGCTTTGGTGCATCCTTATTTTTGGGGAGTGGAACCGCTTGAGTGTGAGGCGAAGCGGGCTGAAGACGCTGCGAAGACGCACAAGTTGTGGCGTTTTATATGCCCAAATACGACTGGATCGGACGACCCAATTATCAACCCGGGAGCGGATCCGAATCTGGGGAAGCTAGCTTGTGCCAGAGTGCTTGTTTGTGTGGCTGAGAAGGATTTGTTGAAGGACAGGGGTTGGTACTACAAAGAATTGCTCCATAAGAGTTCATGGCCTGGAGTTGTGGAGGTGGTGGAGACGAAAGACGAGGACCATGTGTTTCATATGCTGAATCCAAGCTGTGAGAATGCTAAGGTTCTGCTTAACAGAATTGTTTCCTTTATTAAACAGGATTGA 1161 0.4875 MIRCSILSGYRPLPTKYHLHVPTKPNFQSVTNLSSHYLLPSFPIKACNPLPFSSHKLEKPLHSSTTMDNSTSTDSEVAYDIPPILKVYKNGRVERLEGVQVVPPGLHPETNVESKDVVISEEHGISARLYIPKTTYPPRNKLPLLVYFHGGAFIIETPFSPNYHNLLNNIVSEANVIGVSVHYRRAPEHPVPAAHEDSWVALKWVASHSGGTGSEEWLNEHADFGKVFFAGDSAGANIASYLGIRLGTEGLPRVKVEGIALVHPYFWGVEPLECEAKRAEDAAKTHKLWRFICPNTTGSDDPIINPGADPNLGKLACARVLVCVAEKDLLKDRGWYYKELLHKSSWPGVVEVVETKDEDHVFHMLNPSCENAKVLLNRIVSFIKQD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02166 386 Pfam alpha/beta hydrolase fold 145 364 IPR013094 GO:0016787
Spst3g02166 386 Gene3D alpha/beta hydrolase 88 386 IPR029058 -
Spst3g02166 386 SUPERFAMILY alpha/beta-Hydrolases 84 385 IPR029058 -
Spst3g02166 386 PANTHER ARYLACETAMIDE DEACETYLASE 81 370 - -
Spst3g02166 386 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 227 239 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02166 Spst-Chr3 60367985 60369145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02166 74 386 Carbohydrate Esterase AT3G48700 49.695 1.74e-104 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02166 - - gmx:100815625 617.846