Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02158 ATGCAGAAAAAAGATAACATTGATATGAATAATGTTGGTTCTAATCTGGAGCACTATACTCAGGGAGTAGGGGAAAAAGACAGCGCAGATGAAAAGCACTTTGTGCCTGTCCATCCAAATGAAAGTTCATTGGTTTCATCTCCGGTGATGAAAAGTAAATTATCCATGGGTTCAGAGCCAAAGAAGAATGCTAACAAATTGATTCTTAAAGTATATAAGACTTTGGGAAGTGCCATATCACATATTAAACTCTTTTGTGCGCATGAAACTATAAACAATCTCACTCTTTACTACCAGTCTCGCATCCAGAGTAAAATTTTGAAGAGGAAATTTCTTTCCAGTTCTTTAGTATCAAAAAGAATGGATGAAAATTTTTATGCCACTTGTAGAAGGGAATGTAGTATTTGCTTGTATTATTTACACTTGTCTGCTGTAGGGTGTTCATGTTCAAATGACAAGTTTACGTGTCTTGGTCATGCAAAACATTTTTGTTCTTGCCCTTGGAGCAACAAAATTCTCTTATACCGTTATAAGATCAATGATTTGAATGTTCTTTGTCAAGCTTTGGATGGGAAATTAAGTGCAGTCTATAAATGGGCCAAAGAGTATCTCGGACTAACACTGACCTCTGTTGCCTCCAAGAGATCAAAACCACATCCAGAAAATGTTAGTTGTTCAACCTTCCCTTTGCAAGACTTGCATATGAAAGAACCCTATATCCCAGACATCATCAAATGA 738 0.3645 MQKKDNIDMNNVGSNLEHYTQGVGEKDSADEKHFVPVHPNESSLVSSPVMKSKLSMGSEPKKNANKLILKVYKTLGSAISHIKLFCAHETINNLTLYYQSRIQSKILKRKFLSSSLVSKRMDENFYATCRRECSICLYYLHLSAVGCSCSNDKFTCLGHAKHFCSCPWSNKILLYRYKINDLNVLCQALDGKLSAVYKWAKEYLGLTLTSVASKRSKPHPENVSCSTFPLQDLHMKEPYIPDIIK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02158 245 PANTHER LYSINE-SPECIFIC DEMETHYLASE 82 227 - -
Spst3g02158 245 Pfam C5HC2 zinc finger 133 183 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02158 Spst-Chr3 60156855 60158385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02158 83 213 JUMONJI Transcription Factor Family AT1G08620 48.855 1.13e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02158 K11446 - gsj:114398457 208.764