LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g02152	ATGGGGGTTTGCACATCGAAGCCGCAGAAGCCGAACCCTTACGCGCTTCGCGAAGCCGAAGCCGACCCTTCGCGAATTCCGAAAACCCCACTTAGTCCCACCGCCGAGAACCACCGCCGGAAAGATGACGTCACCGCCGGGAAACAGTCCCCGTTCTACAGCCCCAGCCCCGCGCGCTTCCTGAAGAAGTCTCCGGCGCCGGAGGGAGGGAGCAGGAGCGCGACATCCACGCCGAGGAGGTTCTTCCGGCGGCCGTTCCCTCCGCCCTCGCCGGCGAAGCACATAAGGGCGGTGCTGGCGCGGCGGCAGGGGAAGAAGGCGGCGGCGGCGGCGATACCGGAGGAGGGGGAGGATGGCGGTGGAAGTGCAGCGGATTTAGATAAGAGGTTTGGGTTCTCTAAGGAGTTCACTAGTAGGTTGGAAGTTGGTGAAGAAGTGGGTCGAGGGCATTTTGGGTATACTTGTTCTGCTACCTTCAAGAAGGGTGAGCTTAAGGGTCAACAAGTGGCTGTTAAGGTCATACCAAAAGCAAAGATGACAACAGCAATTGCTATTGAAGATGTGAGAAGGGAAGTAAAAATATTGCGAGCTTTGAACGGACACAGCAATTTGATACAGTTCTATGATGCATTTGAAGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGGGAACTCTTAGATATGATATTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTGATGGCGCAGATACTAAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTTAAACCAGAGAATTTTTTGTACACTAAAAAGGATGAAAGTTCTGAGTTGAAAGCTATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGATATTGTTGGAAGTGCATACTATGTGGCCCCTGAAGTTCTCCATAGATCTTATAGCACAGAGGCTGATGTGTGGAGTATAGGCGTGATAGCATATATTCTTTTATGTGGTAGTCGCCCATTTTGGGCTCGGACTGAATCTGGTATTTTTAGGGCAGTTCTGAAGGCTGATCCTAGCTTTGATGAAACACCGTGGCCCTCTTTGTCCTCAGAAGCAAAGGATTTTGTCAAACGCTTATTGAATAAGGACCCACGGAAGCGAATATCTGCTGCTCAGGCTCTAAGTCATCCTTGGATACGGCATCACAATAACGTAAAAGTTCCACTTGATATTTTAATATTTAAGCTCATGAAGACATATATGAGATCATCATCCTTACGCAAGGCTGCCTTAAGGGCCTTGTCAAAAACATTGACTGCAGATGAACTATCTTATCTGAGGGAGCAATTTTCACTGCTAGAACCAAGCAAAAATGGCAGCATATCTTTAGAGAATGTTAACAAGACCTTGATGAAATACGCAACAGATGCCATGAAAGAGTCTCGCATCCCTGACTTTCTTACTTCGCTGAATTCTCTACAATATAGAAGGATGGATTTTGAAGAGTTCTGTGCAGCTGCATTAAGTGTGCATCAACTTGAAGCTCTTGATCGTTGGGAACAACATGCCCGCTGTGCCTATGAGCTTTTTGATAAAGATGGAAACAGGGCTATTGTCATTGAAGAGCTTGCTTCAGAACTTGGACTTGGTCCTTCTATCCCTGTTCATGTTGTTCTTCACGACTGGATACGCCACACTGATGGGAAATTAAGCTTTCTTGGGTTTGTGAAATTATTACACGGTGTATCTAGCCGAAGCCTTGCGAAGGTTCAATAA	1785	0.4678	MGVCTSKPQKPNPYALREAEADPSRIPKTPLSPTAENHRRKDDVTAGKQSPFYSPSPARFLKKSPAPEGGSRSATSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKAAAAAIPEEGEDGGGSAADLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSATFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLIQFYDAFEDQDNVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMAQILNVVAFCHLQGVVHRDLKPENFLYTKKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDETPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRHHNNVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTADELSYLREQFSLLEPSKNGSISLENVNKTLMKYATDAMKESRIPDFLTSLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFDKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLAKVQ	594

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst3g02152	594	PANTHER	SERINE/THREONINE-PROTEIN KINASE	126	569	-	-
	Spst3g02152	594	SUPERFAMILY	Protein kinase-like (PK-like)	136	443	IPR011009	-
	Spst3g02152	594	ProSitePatterns	Protein kinases ATP-binding region signature.	146	172	IPR017441	GO:0005524
	Spst3g02152	594	FunFam	CDPK-related kinase 1	438	511	-	-
	Spst3g02152	594	FunFam	CDPK-related kinase 1	133	228	-	-
	Spst3g02152	594	SMART	serkin_6	140	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst3g02152	594	Gene3D	-	420	511	-	-
	Spst3g02152	594	FunFam	CDPK-related kinase 3	132	304	-	-
	Spst3g02152	594	Gene3D	Phosphorylase Kinase; domain 1	142	228	-	-
	Spst3g02152	594	Pfam	Protein kinase domain	141	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst3g02152	594	Gene3D	Transferase(Phosphotransferase) domain 1	229	414	-	-
	Spst3g02152	594	SUPERFAMILY	EF-hand	430	584	IPR011992	-
	Spst3g02152	594	MobiDBLite	consensus disorder prediction	1	92	-	-
	Spst3g02152	594	FunFam	Calcium-dependent protein kinase SK5	312	407	-	-
	Spst3g02152	594	ProSiteProfiles	Protein kinase domain profile.	140	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst3g02152	594	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	264	276	IPR008271	GO:0004672\|GO:0006468
	Spst3g02152	594	CDD	STKc_CAMK	141	401	-	-
	Spst3g02152	594	Gene3D	-	427	581	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst3g02152	Spst-Chr3	59856324	59860537	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst3g02152	1	590	EF-hand Containing Proteins	AT3G50530	71.541	0.0	914

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Spst3g02152		Pkinase	2.7e-72	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g02152	K13412		-	gmx:100798913	1061.98