Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02146 ATGCTTACCATAAGTAATACCCAGCTCGACATCAATTTCTACGATGAATCGTGCCCTAATTTTCCCACCATTGTTAGATATGGTGTTTGGTCAGCCATAAAAAATGACAACAGAATGCCTGCATCCCTCCTTCGACTGCACTTTCACGATTGCATAGGATGCGATGCTTCTGTGCTTCTTGAAGATACACCATATTTCACGGGCGAAAAGAATGCTTTTCCTAATCGCAATTCACTTAGGGGACTTGAAGTCATTGATCATATAAAAGAACAAGTTGAAAGGCTATGTCCATACACAGTTTCCTGCGCTGATATCTTAGCCTTAGCAGTTAGGGAAGCTATTGATCTGGTTGGAGGGCCTTCTTGGTCTGTTGCATTAGGCCGAAGAGATGCAATAACAGCCAATCAGACAGCAGCTAATGAACAAATTCCCTCACCATTCGAGCCTCTGGACAGCATCATTGCAAAGTTTGCTTCAAAGGGTCTAAACTTGAGGGATGTTGTAGCGCTTTCAGGAGCACACACAATTGGTTATGCTCGATGCTTGACCTTCAAAAGGAGACTCTTTGACTTTCAAGGTTCTGGCAAACCTGATCCTGTGCTTGACTTTTCACCACTTCTCGCAAAACTGCAAAGCATGTGTCCAAATAAAGAAGCTTCAAACAGCAACCTTGCTCCTCTGGATGCTACAAGTATCTTGACGTTTGATAATGAGTATTATAGAAATCTCGTACACAACGCAGGGCTTCTAGAATCTGACCAAGCACTAATTCGGGATCGTAGGACAGCTGCCATGGCTTATTCTTACAGCATCGACCAATCTTCCTTCTACAATGATTTTGCTACATCCATGGTGAAGCTTAGTAATGTAGGTGTGCTTACAGGAATGCAAGGACAAATTAGAAAGAAATGTGGCTATGTAAACTACTAA 930 0.4247 MLTISNTQLDINFYDESCPNFPTIVRYGVWSAIKNDNRMPASLLRLHFHDCIGCDASVLLEDTPYFTGEKNAFPNRNSLRGLEVIDHIKEQVERLCPYTVSCADILALAVREAIDLVGGPSWSVALGRRDAITANQTAANEQIPSPFEPLDSIIAKFASKGLNLRDVVALSGAHTIGYARCLTFKRRLFDFQGSGKPDPVLDFSPLLAKLQSMCPNKEASNSNLAPLDATSILTFDNEYYRNLVHNAGLLESDQALIRDRRTAAMAYSYSIDQSSFYNDFATSMVKLSNVGVLTGMQGQIRKKCGYVNY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02146 309 PRINTS Plant peroxidase signature 99 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 18 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 42 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 165 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 80 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 118 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 ProSiteProfiles Plant heme peroxidase family profile. 8 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 SUPERFAMILY Heme-dependent peroxidases 8 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 CDD secretory_peroxidase 8 307 IPR033905 GO:0004601|GO:0042744
Spst3g02146 309 ProSitePatterns Peroxidases proximal heme-ligand signature. 166 176 IPR019793 -
Spst3g02146 309 PRINTS Haem peroxidase superfamily signature 166 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Haem peroxidase superfamily signature 118 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Haem peroxidase superfamily signature 40 54 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Haem peroxidase superfamily signature 100 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 FunFam Peroxidase 144 287 - -
Spst3g02146 309 Pfam Peroxidase 29 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst3g02146 309 Gene3D - 12 308 - -
Spst3g02146 309 Gene3D Peroxidase, domain 2 144 287 - -
Spst3g02146 309 PANTHER PEROXIDASE 72-RELATED 6 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02146 Spst-Chr3 59596603 59598280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02146 7 306 Peroxidase AT1G49570 59.076 6.09e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02146 K00430 - gmx:100805712 506.138