Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02144 ATGCCGGTGGCAACAGTGGGCCTGTCTGCTGCAACCAAAGAAGAGAAGGAAGAGAGTGCTATGAATAGGCTTTCTCTTCAGACCCCTCCTTCCTTGAGAGAGGGATGTGCTTCAAGGGGATCCAGAAGCAGTTCCAACAGGGCTGTTTCTTCTTCTCCTCCTACAATTCACACCAGTTTGAGGACATCAAATCTTCAACAGACCGCTAGGAAACAGAGGAGATGCTGGTCCCCTGAGTTGCACAGACGATTTGTTAATGCTTTGCAGAAGCTAGGAGGTTCTCAAGCGGCAACACCCAAGCAAATTAGAGAGCTCATGCAGGTTGATGGTCTGACTAACGATGAAGTGAAAAGCCACCTACAAAAATACCGGCTTCATACACGGAGAGTTCCAGCTGCAAGTGGTAATCAGCCAGTTGTGGTTCTTGGAGGTTTGTGGATGTCTCCAGATCAGTACAATGACTCCTCGAAAGTTAGCAGTTCAGGGTCAGATTCTCCTCAAAGTCCCCTTCATTTGACAGCAGGGTCACGAGGAGGAACATCCCCAACCGAAGGTGAGAGCATGGAAGATGATGAAGATGCAAGATCCGAGAGTTTTAGTTGGAAAAGTCATCTGCACAAACCTGGAAATGTTGATGTATAG 642 0.4782 MPVATVGLSAATKEEKEESAMNRLSLQTPPSLREGCASRGSRSSSNRAVSSSPPTIHTSLRTSNLQQTARKQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAASGNQPVVVLGGLWMSPDQYNDSSKVSSSGSDSPQSPLHLTAGSRGGTSPTEGESMEDDEDARSESFSWKSHLHKPGNVDV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02144 213 MobiDBLite consensus disorder prediction 1 69 - -
Spst3g02144 213 MobiDBLite consensus disorder prediction 153 213 - -
Spst3g02144 213 MobiDBLite consensus disorder prediction 194 213 - -
Spst3g02144 213 Pfam Myb-like DNA-binding domain 73 124 IPR001005 -
Spst3g02144 213 NCBIfam myb-like DNA-binding domain, SHAQKYF class 71 126 IPR006447 GO:0003677
Spst3g02144 213 Gene3D - 70 128 - -
Spst3g02144 213 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 202 IPR044787 GO:0003700|GO:0006355
Spst3g02144 213 MobiDBLite consensus disorder prediction 22 69 - -
Spst3g02144 213 MobiDBLite consensus disorder prediction 153 183 - -
Spst3g02144 213 SUPERFAMILY Homeodomain-like 68 129 IPR009057 -
Spst3g02144 213 FunFam Myb family transcription factor 70 128 - -
Spst3g02144 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 128 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02144 Spst-Chr3 59552500 59553737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02144 62 150 G2-like Transcription Factor Family AT2G03500 70.213 5.37e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst3g02144 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02144 - - gmx:100812420 342.043