Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02140 ATGCTGAGGGATTTCAAACTCCCACGCCGAAACCCTGGAAAAAACGAAGAACCGGAGAATGTGGATCCTTTGGACTCATCCACCACGGTTCAGAGGCACGCGGAAGGTTCTAGATCTCCGTTGCACACAATTCAAGAACCTGATGCGCATTGCGTGAGCAAGATTGAGAGGACTCCTTCGAAGGCCAACAACAAAGCTCGCGGAGGAGCTGAGCTTCGCACGCCGGATAAGCACGGAGGAGGTAGCATGCTGTGGAAACACCGGTTCGGCTGGAATCACAAGAACGACGCGGTTTCCTCGTTCGGTGACGATAGGAGAGGACCTAGTTTTGGGAATGTGACTCCTCGCGTCCCTCGCACTGTGGGGAGAGCTTCTTCGAGTGTCACGGCTTGTTCCGAGAGCAACTCCACGCAGAGCACTCCGACTAAGAGTGTGACTAAGCCGCCTCCGAGTTCAAGTGTTCGGAGCAAAGCTGATGGAGGAGGCTTCAGTGCTCGTTTGGGGAATTATGCTGCATTGTATAAAGGGGTTCCCAGTTCGGCTTGCCTGACTCCCACGGTTGTGAACACGGTCGAAGTGCCTCACTTTGATCTCAAGGAAGATTCTTCGTTTTGGATTAACCACAATGTACAGGTTATTATTCGTGTTCGTCCTCTCAATAGCATGGAGCGATGTACACAAGGATACAACAGATGCCTGAAACAAGATAGCTCTCAGAGCATTAGTTGGATTGGGCATCAGGAAAACCGGTTCACCTTTGATCATGTTGCATGTGAAACCGTAGACCAGGAAATGATTTTCAGATTGGCTGGTCTTCCAATGGTAGAGAACTGCCTTTCAGGATATAATAGTTGTATGTTTGCGTATGGACAGACAGGAAGTGGGAAAACATATACAATGCTCGGTGAAATTGAAGATTTAGATGTGAAGCCTAGTCCCCATCGTGGAATGACTCCACGAATATTTGAGTTTTTGTTTGCCAGGATCCAAGCTGAAGAGGAAAGCCGAAGAGATGAGAACTTAAAATACAATTGCAAGTGTTCTTTCTTGGAGATTTACAATGAACAAATTACCGATCTACTTGATCCCTCCTCTACTAATTTGCTGGGATCTGCAAATAGAAAAGTTGCCGCAACAAATATGAACAGAGAGAGCAGTAGGTCCCATAGTGTTTTTACATGTGTAATTGAGAGCACATGGGAAAAGGATTCTACAACTAATTATCGTTTTGCAAGGTTAAACCTGGTTGATCTTGCTGGCTCTGAAAGACAGAAGACTTCTGGTGCTGAGGGGGAGCGTTTAAAAGAAGCTGCTAACATCAATAAATCATTATCTACATTGGGTCATGTTATTATGATATTAGTGGATGTAGCAAATGGGAAGCAGAGGCATATCCCGTATAGAGACTCCAGACTAACGTTTCTTCTTCAGGACTCTCTTGGTGGAAACTCCAAAACAATGATCATTGCCAATGTTAGCCCTTCTATCTGCTGTGCCACTGAAACATTGAATACACTTAAATTTGCTCAGAGAGCAAAACTTATTCAGAATAATGCTGTGGTGAACGAAGATTCTACTGGGGATGTAATAGCTTTACAACATCAAATTCGGCTTTTGAAG 1620 0.4525 MLRDFKLPRRNPGKNEEPENVDPLDSSTTVQRHAEGSRSPLHTIQEPDAHCVSKIERTPSKANNKARGGAELRTPDKHGGGSMLWKHRFGWNHKNDAVSSFGDDRRGPSFGNVTPRVPRTVGRASSSVTACSESNSTQSTPTKSVTKPPPSSSVRSKADGGGFSARLGNYAALYKGVPSSACLTPTVVNTVEVPHFDLKEDSSFWINHNVQVIIRVRPLNSMERCTQGYNRCLKQDSSQSISWIGHQENRFTFDHVACETVDQEMIFRLAGLPMVENCLSGYNSCMFAYGQTGSGKTYTMLGEIEDLDVKPSPHRGMTPRIFEFLFARIQAEEESRRDENLKYNCKCSFLEIYNEQITDLLDPSSTNLLGSANRKVAATNMNRESSRSHSVFTCVIESTWEKDSTTNYRFARLNLVDLAGSERQKTSGAEGERLKEAANINKSLSTLGHVIMILVDVANGKQRHIPYRDSRLTFLLQDSLGGNSKTMIIANVSPSICCATETLNTLKFAQRAKLIQNNAVVNEDSTGDVIALQHQIRLLK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02140 540 ProSitePatterns Kinesin motor domain signature. 411 422 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst3g02140 540 MobiDBLite consensus disorder prediction 100 160 - -
Spst3g02140 540 MobiDBLite consensus disorder prediction 1 81 - -
Spst3g02140 540 MobiDBLite consensus disorder prediction 119 153 - -
Spst3g02140 540 MobiDBLite consensus disorder prediction 22 38 - -
Spst3g02140 540 Gene3D Kinesin motor domain 369 527 IPR036961 -
Spst3g02140 540 PRINTS Kinesin heavy chain signature 379 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g02140 540 PRINTS Kinesin heavy chain signature 281 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g02140 540 PRINTS Kinesin heavy chain signature 412 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g02140 540 PRINTS Kinesin heavy chain signature 465 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g02140 540 MobiDBLite consensus disorder prediction 1 21 - -
Spst3g02140 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 530 IPR027417 -
Spst3g02140 540 Gene3D Kinesin motor domain 202 368 IPR036961 -
Spst3g02140 540 ProSiteProfiles Kinesin motor domain profile. 209 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g02140 540 PANTHER KINESIN-LIKE PROTEIN KIN-12D 1 540 IPR044986 -
Spst3g02140 540 Pfam Kinesin motor domain 215 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g02140 540 Pfam Kinesin motor domain 369 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g02140 540 SMART kinesin_4 207 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02140 Spst-Chr3 59396586 59400201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02140 165 518 Calmodulin-binding Proteins AT5G65930 35.219 1.69e-50 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02140 K10400 - gmx:100795729 979.163