Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02120 ACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGATTCCTTCATAAACAAGTTAAGCTGCTCAGTGCTCCATACCTTGAAAGTTCAGCAGCAGCCAAGATGCAGGGTATGGAGACATGCAGCCTGAGGAGTAGAGGGTTATGCCTTGTTCCTGTGTCATTTACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCTATCAAAACTACTACTTCACCTAAATTGGAGAAGGATGTCTCGCAATTTCATTGA 270 0.4333 TDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSAAAKMQGMETCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTTTSPKLEKDVSQFH 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02120 89 CDD bHLH_AtbHLH_like 1 25 IPR045239 -
Spst3g02120 89 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02120 Spst-Chr3 58974845 58975779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02120 1 78 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 60.256 1.20e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02120 - - gmx:100809747 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02120 3 58974845 58975779 Spst3g02120 3 58974845 58975779 ECH