Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02114 ATGCTTGTATTATGCCAGAGCAATGACAAAGTATGCATGTGTTTGCAAAGTGCGCGTGTGTTTCAGTTTCCAAAGAAGTGTGGTGTGGATGAGACTGTTCTGAGATGGGAAAACAATCCATTTCCTCTCTGTCATGTTCACAACTTGGTCTTTCCTTCTCCTTCACCAGAATTGACTAAGCTTTCATGTCATGATCTTTTGCCTTCATTTTCTGTTGCAGGAAGAGACAGTAATGCTACTGACATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGGGTTTTCACTCACCACTCCAAAGGGAAGCATGATGCGGATAACAAAGGCACAAAAGAGAAGAAGAAAGGTCTAGGAAAAAGGCATGGAGAGACCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGTAGCATTGAGAAAATCTTTGGGGAATTTGAAAGGGAGCAACAACTACTGGGGATAAGGCCTGCCACTCCTCCTGAGAGACCCAAAACTCCACCTTATGTCCCTCCAAGAGCTCCTTCTCCTAGGCCTCCTTCTCCAAGGGCTGCATCTCCAAGGCCTCCATCTCCAAGGGCTGCTTCTCCCAGGGCTTCTTCTCCGCGAGGTACCTCTCCCAAAGCTGCATCTTCCCGGATTGCTCATCACCACAAGGAGGTTGGCTACAGACCGGAACCAACTCTGAGGCAACAGAATGCCTCAGCTACTAAAATCCAGGCTGTTTACAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCACTAAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTAAATGCCATGAAACACATGCAACTGTTAGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATAAGGAAACAGCCAGTATCTTGGGCAAACTCACTTCTGAAGCAGGTACTGAAGAGTGGGATGATAGCTTACTGACCAAAGAGGAAGTAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGCTATGGAAAGCCACTCCAAAATCAAATCACACCCCAGCGACAGATACAAGAGCAGGTGGATTTCCTTGGTGGTGGAACTGGTTGGAAAGACAAGCACCTGCAGCAGCAACTCCACAAGAAAGACAAGTGTTGAAGAATTTTCAACCCACACCTCCAAGACCATACCCAGAACAAAAGACTAGTCCAAGACCTGGCTCTAGCACTCAAAGACAGCAGCAGGCTCATTTTTCCTTTGATAACATGGACACTCCCACACCAAAGTCCACAAAATCAACCATAGTGACATCTTCAAAACCAGCACGAACACCTCCATATAGAACTCCTCAGGCAAACAGTTCAGGTTCAGGCTCTAAATATCTGAGACCAAGGGGTGTGGGAGCCAATTCACCTTTTGATGTGCCACTGAAGGATGATGACAGTCTCACAAGCTGCCCACCATTTTCAGTGCCAAACTACATGGCTCCAACCCTCTCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATCCTAGAGAAAGGCTTGGTGGTACTCCCACAAGTACTGATTCAAGGAGAAGACTCTCATTCCCTTTGTCACAAGGAATAGGATCTTTCAAGTGGTCTAAAGGGTTCTCGAGCAAGGATCAAATGGTGCCAGATAACTTTCAGCCACTTGACTCTATAGGAAACGTGAGTGTGGATTCAACAGTGTCTTTGCCCGCAAGGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1830 0.465 MLVLCQSNDKVCMCLQSARVFQFPKKCGVDETVLRWENNPFPLCHVHNLVFPSPSPELTKLSCHDLLPSFSVAGRDSNATDMGKKGSWFSAIKRVFTHHSKGKHDADNKGTKEKKKGLGKRHGETNSFIPLFREPSSIEKIFGEFEREQQLLGIRPATPPERPKTPPYVPPRAPSPRPPSPRAASPRPPSPRAASPRASSPRGTSPKAASSRIAHHHKEVGYRPEPTLRQQNASATKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKETASILGKLTSEAGTEEWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSNHTPATDTRAGGFPWWWNWLERQAPAAATPQERQVLKNFQPTPPRPYPEQKTSPRPGSSTQRQQQAHFSFDNMDTPTPKSTKSTIVTSSKPARTPPYRTPQANSSGSGSKYLRPRGVGANSPFDVPLKDDDSLTSCPPFSVPNYMAPTLSAKAKVRASSNPRERLGGTPTSTDSRRRLSFPLSQGIGSFKWSKGFSSKDQMVPDNFQPLDSIGNVSVDSTVSLPARVGRKPFTRFV 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02114 609 MobiDBLite consensus disorder prediction 152 214 - -
Spst3g02114 609 PANTHER IQ-DOMAIN 5-RELATED 82 556 - -
Spst3g02114 609 MobiDBLite consensus disorder prediction 536 550 - -
Spst3g02114 609 SMART iq_5 230 252 IPR000048 GO:0005515
Spst3g02114 609 MobiDBLite consensus disorder prediction 527 550 - -
Spst3g02114 609 MobiDBLite consensus disorder prediction 411 498 - -
Spst3g02114 609 ProSiteProfiles IQ motif profile. 231 259 IPR000048 GO:0005515
Spst3g02114 609 Pfam Protein of unknown function (DUF4005) 460 560 IPR025064 -
Spst3g02114 609 Gene3D - 212 251 - -
Spst3g02114 609 MobiDBLite consensus disorder prediction 425 483 - -
Spst3g02114 609 MobiDBLite consensus disorder prediction 99 130 - -
Spst3g02114 609 MobiDBLite consensus disorder prediction 100 122 - -
Spst3g02114 609 MobiDBLite consensus disorder prediction 159 195 - -
Spst3g02114 609 Pfam IQ calmodulin-binding motif 233 252 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02114 Spst-Chr3 58794859 58801183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02114 82 608 IQD Protein Family AT3G59690 51.773 1.66e-162 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02114 - - gmx:100807777 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02114 3 58794859 58801183 Spst3g02114 3 58794859 58801183 ECH