Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02089 ATGTCTACAATCTTCAACATTCTTCTCTTGTTGTTCACGTTTTGTTGTTGTTCTTCTTCTTTTTCACACCCTCGCCGTGTCCTTCACCAACCACTCTTCCCCAGAATCTCTCTCCCTCCAACACAAGCTCCAGCTTTATCCCCTCAACCCCAAAAACAGCACCATTTACCCAAGCTTCCGTTTTCTTCTTCTTCTTCCTCATCGTCGCCGCCACCGCCGCAAAAACCTTTCTTTCCTTCTTACCATTCCCCCCCACTCCCGCCTTCCCCCGCCGTCGTCGCCACTTTCCCCGCCAACATCTCCTCCCTCCTCCTCCCCCGCCCCTACGCCCGCCACCACCGCTCCGCCGCCGCACTCGCCGTATCCCTCTCCCTCTTCTCCCTCGCCCTCCTAGCCGCCGCCGCCTTCTTCCTCCTCCACCGCCGCCGCGCTCACAAGTCTTCCTCCTCCGCCGCAACCCATGACGACGACAAGGCCTCGAGATCCGACAGCCTCCGCCTGTTCCCACCGAACACCGCTGCCTCCGACGGAACTGATAGAAAACCCCGTGGCAAGTCCTCCCCGACGTCGGAGCTACTCTACCTCGGCACGGTGGCGAACTCCGTAAACTCAACAATGGACACAAGCTCCAGCCACCACCACGACGGTTTCCGGCCACCGTATCAAAAACTCGGTGACTCACCGGAACTGAACCCACTTCCGCCACTGCCACGCCACAAATTCAAACCATGGATGACTGAAGAAGACCATGATAAAAATGTGAAAGAAAAAGTGGAACAAGAAGAAGAACAAGAGGCAGAAGAAGAAGATGGAGAACAGTTTTTTTCTCCAAGAGGTTCTTCTGGTGGGAACAAACAGCATAGTCCTCCTTCTCCTTCTGCTGTTGCTGCTTCAAGTTCACGCGTGTTCCACGTGGAAAATAAATTCGGTTCTACAAGCTTCACTTCTCGAACCCCTTCTTACCCTCGTTCCAATTCCCTCACTTTCTCTCGCTCTCCTTCTCTTAATTTCAGCCCCGCAAGTGTTAAATCACTGCCTCCAAACAACCCTGCTTCCCCTTCTTTCTCTTCACCATCTTCTTCTCCCAGGGAAGAATGGCATGTTCCTACACTAGATAAAACTTCTCCGGCGAGAAATTTACCTCCTCCACCACCGCCGCCACCGCCGCCGCGGTTTTGGGAGGCCCCGGTTTCTGTTAGGAAAGAGAGTGAGGAGACTCCGAAGCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCGGACAGGGTCATGGTTTGGGATCGGTTGAGACCCAGTTCTTTTCAGTTGAACGAGGACATGATTGAAACGCTTTTTATGATAAATAATTCCAAGGAGGGTTTCGGGGTTGCGATTAGAGATAATACTCGGCGCCAAACAGTTCATTCTGCTTCTCCCATGCCCTTGGAGAATAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGAGCTCTCAATGTCACTATTGATGAAGTTTGTGATGCCCTCAGAGAAGGAAATTGTGATACGTTGGGAACAGAACTTCTTGAAAGTTTATTAAAGATGGCACCAACTAATGATGAAGAATCTAAGCTGAAGGAGTTTCAAGATGAATCGCCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTCAAAGTTGTGCTTGATATACCTTTCGCTTTTAAGAGAATGGATGCTATGCTCTACATGGCTAATTTTGATTCAGAATTAGAGTACCTTAAGAGGTCTTTTGAAACCCTGGAGGTGGCCTGTGAGGAATTAAGGAATAGTCGAATGTTTTTGAAGATACTCGAAGCAGTGCTGAGAACAGGAAATCGAATGAATGTTGGCACCAATCGTGGTGATGCTCATGCGTTCAAACTGGACACACTTTTGAAGTTAGTTGATATTAAAGGAACTGATGGAAAAACTACACTGTTGCATTTTGTTGTACAGGAAATTGTCAGAACCGAGGGTTCTCACAATTCTGGTTCTAACCACCATGCCTCTGACAATGTCCACCAATGCAGTCTCCAAGATGAGGTTGACTTTAAAAAGCTTGGCCTGCAAGTTGTGTCAGGTTTGAGTGGGGAGCTCACCAATGTTAAAAAAGCAGCTGTTATGGATTCAGACATACTCAGTAGTGATGTTGCCAAACTTGCCAGAGGAATTGAAAAAGTAGTGCAAGTTGTGAAATTGAATGAGGAGTCACCTTTGAAAGAAACTAACCAAAAGTTTTCGGAGGCAATGAAAGGTTTCTTGGAAAGGGGAGAGCAAGAGATTTCAACAATCCAGGCCCAAGAGAAAAATGCCCTCTCTTCAGTGAAGGAGATAACCGAGTATTTCCATGGAAATTCAGTAAAGGAAGAAGCTCATCCATTTAGAATTTTTATGGTTGTGAGGGATTTCCTTTCTATTCTAGATGCTGTTTGCAAGGAAGTTGGTAAAGTGAATGAGAGGACTTTGGTTGGTTCCCGTCATTCTGTAATGCCTGCAAATCCTATAATTCAATCCTTTTTCCCTGAGATTATTGGTAAGCAACCATCTGATTCCTCCGAATCTGATTAA 2583 0.4735 MSTIFNILLLLFTFCCCSSSFSHPRRVLHQPLFPRISLPPTQAPALSPQPQKQHHLPKLPFSSSSSSSSPPPPQKPFFPSYHSPPLPPSPAVVATFPANISSLLLPRPYARHHRSAAALAVSLSLFSLALLAAAAFFLLHRRRAHKSSSSAATHDDDKASRSDSLRLFPPNTAASDGTDRKPRGKSSPTSELLYLGTVANSVNSTMDTSSSHHHDGFRPPYQKLGDSPELNPLPPLPRHKFKPWMTEEDHDKNVKEKVEQEEEQEAEEEDGEQFFSPRGSSGGNKQHSPPSPSAVAASSSRVFHVENKFGSTSFTSRTPSYPRSNSLTFSRSPSLNFSPASVKSLPPNNPASPSFSSPSSSPREEWHVPTLDKTSPARNLPPPPPPPPPPRFWEAPVSVRKESEETPKPKLKALHWDKVKASSDRVMVWDRLRPSSFQLNEDMIETLFMINNSKEGFGVAIRDNTRRQTVHSASPMPLENRVLDPKKSQNIAILLRALNVTIDEVCDALREGNCDTLGTELLESLLKMAPTNDEESKLKEFQDESPFKLGPAEKFLKVVLDIPFAFKRMDAMLYMANFDSELEYLKRSFETLEVACEELRNSRMFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHNSGSNHHASDNVHQCSLQDEVDFKKLGLQVVSGLSGELTNVKKAAVMDSDILSSDVAKLARGIEKVVQVVKLNEESPLKETNQKFSEAMKGFLERGEQEISTIQAQEKNALSSVKEITEYFHGNSVKEEAHPFRIFMVVRDFLSILDAVCKEVGKVNERTLVGSRHSVMPANPIIQSFFPEIIGKQPSDSSESD 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02089 860 MobiDBLite consensus disorder prediction 277 364 - -
Spst3g02089 860 MobiDBLite consensus disorder prediction 148 163 - -
Spst3g02089 860 MobiDBLite consensus disorder prediction 241 260 - -
Spst3g02089 860 SUPERFAMILY Formin homology 2 domain (FH2 domain) 381 825 - -
Spst3g02089 860 MobiDBLite consensus disorder prediction 190 210 - -
Spst3g02089 860 Gene3D Formin, FH2 domain 407 833 IPR042201 -
Spst3g02089 860 Coils Coil 582 602 - -
Spst3g02089 860 MobiDBLite consensus disorder prediction 376 394 - -
Spst3g02089 860 PANTHER FORMIN-RELATED 11 851 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst3g02089 860 MobiDBLite consensus disorder prediction 66 81 - -
Spst3g02089 860 SMART it6_source 401 827 IPR015425 -
Spst3g02089 860 MobiDBLite consensus disorder prediction 43 81 - -
Spst3g02089 860 ProSiteProfiles Formin homology-2 (FH2) domain profile. 401 838 IPR015425 -
Spst3g02089 860 MobiDBLite consensus disorder prediction 145 406 - -
Spst3g02089 860 Pfam Formin Homology 2 Domain 403 812 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02089 Spst-Chr3 57385896 57390090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02089 376 852 FH2 protein (formin) Gene Family AT3G25500 63.900 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02089 - - vun:114175163 1327
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02089 3 57385896 57390090 Spst3g02089 3 57385896 57390090 ECH