Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02085 ATGGAGAAGCAGAAAAGTGAGAAGGAGGGGTGTGTGAATGTGATGCTGTTACAAAGAAGTGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAAGAGGTGGCAGCCAAGGAGATTGAAAGCTTGGCTAAAGAAGATGAGAAGGTGAGAGAGTTGGCAAGTGAGCTTGGGGTGGTCAGGGTGTTGGTTTCTATGGTGGCTTCCAACGTCGCTGGCCGCCGCCGAGTAGGACTCAAGGCACTGATCCAGCTATCCAATGGAAGTCACAAGAACAAGGCTTTGATAGTAGAGGCAGGAATGTTGTGCAAACTGCCCAAGAAAAATTACCTTGAAGATGAATCAATAAGTGAATTTGCAGACTTGCTCGCTTCATTGTCTTCTCTTGGAAACCTCCAATTTCCTCATTCTTCATTACACTTTCTCCAATTTCTCATTGACATTCTAAAGTCATGTCCAAGTTTTGATACAAAGCAATCGTGTTTGGTAGCCATGTCCAACATCTCAGCTTTGTTAGAGAATGCAAGGCCTTTGGTTTCTAAAGGTGTTGTACCTATTATCTTGAAACTGTCCTCAGAGAGAGGAACTTCAGAGAAAGCACTTACCATCCTTGGAAACTTGGGGGTGACTTCAATCGGAAAGAAAGCATTGGAGAACAGCTCAATGGTGCCAAAATGCTTCATTGAGATCTTATCTTGGGAAGATAAACCCAAATGCCAAGAGTTGTCAGCTTATATTCTGATTATTCTAGCTCATAAAAACTTAACACAGAGGGATAAAATGGTAGAGTCAGGGATTATCCCTGTACTTCTTGAAGTAGCTTTATTAGGAGGGAGTTTTTTAGCTCAGAAAAGAGCACTGAAATTATTGCAATGGTTTAAGGATGAACGCCAAGTACAGATGGGGCCACATTCAGGCCCACAGGCTTCAGGTGTTGCAAATGAATTACCTATAAATCGAAGAGACACAAAAGAAGGGAAGAGAATGATGAAGAGTTTAGTGAAAGAAAGTCTGCGTAGGAACATGGAAATAATATCTAAAAGAGCTAATGCAGGTAGGGATTCTTCTAATGAGCTGAAGTCCCTGGTTACCAGCACAAGCTCCAGAAGTTTGCCCAACTAA 1119 0.4236 MEKQKSEKEGCVNVMLLQRSVKKLHFGSWEEKEVAAKEIESLAKEDEKVRELASELGVVRVLVSMVASNVAGRRRVGLKALIQLSNGSHKNKALIVEAGMLCKLPKKNYLEDESISEFADLLASLSSLGNLQFPHSSLHFLQFLIDILKSCPSFDTKQSCLVAMSNISALLENARPLVSKGVVPIILKLSSERGTSEKALTILGNLGVTSIGKKALENSSMVPKCFIEILSWEDKPKCQELSAYILIILAHKNLTQRDKMVESGIIPVLLEVALLGGSFLAQKRALKLLQWFKDERQVQMGPHSGPQASGVANELPINRRDTKEGKRMMKSLVKESLRRNMEIISKRANAGRDSSNELKSLVTSTSSRSLPN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02085 372 SUPERFAMILY ARM repeat 21 291 IPR016024 -
Spst3g02085 372 MobiDBLite consensus disorder prediction 343 372 - -
Spst3g02085 372 Gene3D - 14 305 IPR011989 -
Spst3g02085 372 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 6 371 - -
Spst3g02085 372 MobiDBLite consensus disorder prediction 349 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02085 Spst-Chr3 57322880 57324525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02085 30 304 U-box Gene Family AT1G67530 26.950 2.73e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02085 - - var:108327871 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02085 3 57322880 57324525 Spst3g02085 3 57322880 57324525 ECH