Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02059 ATGGGTTCGGGCGATTGGTTTAAGACAATAATCAGCTCAAGGAAATCAAAAGAAGGCAGATCAAGGAAAGTAAAGACTAAGACTTATAGAGGAAAAAAGTCCAATGGTTTAGCAAATGGCACTAAAAGTGAAAATCTAGAGTCAGCTGGAGTATCCATTGAAACTATTGCTGCAACAAGGATTCAAACAGCATTCCGAGCTTATAAGGCTAGAAAATATTTACGTCGCTTGAGAGGATTCACAAAACTGAAAATCCTGACTCAAGGTTGCTCTGTCCAAAAACAAGCTAGTACAACTATAACTCATCTTCATTCATGGAGCAAAATACAGGCTGAGATTAGAGCTCGCCGAATATGTATGGTGACAGAAGACAGGATCAAGCGGAAGAAATTACATTCTCAACTAAAACTAGAGGCCAAGATTCATGATCTGGAGGTGGAATGGTGTGGTGGCTCTGAAACCATGGAGGAAATCCTTGCAAGGTTACATCTAAGAGAAGAAGCAGCAGTTAAGCGGGAAAGAAGCATGGCATATGCCTTCTCTCATCAGTGGAGGGCCAACTCTAGCCAAGGTCTAGGTAACTATGAACCTGGCAAAGCTAGTTGGAGTTGGAGCTGGAAGGACCGCTGGATTGCTGCGCGCCCTTGGGAAAGCCGTGTCCCCAGTGCAACCATTAGTCCCAGGAAAGATCAAACTATGATGTCAAGCAAAGTTAAAAAGGGTAATGCAAAAGGGACTACTACTAAAGCTAGAAGAAGGTTGTCTTACCCTGCTACAGAGAAAAAAGCAGTGCAGGAAGGAAAGCAATGA 810 0.4309 MGSGDWFKTIISSRKSKEGRSRKVKTKTYRGKKSNGLANGTKSENLESAGVSIETIAATRIQTAFRAYKARKYLRRLRGFTKLKILTQGCSVQKQASTTITHLHSWSKIQAEIRARRICMVTEDRIKRKKLHSQLKLEAKIHDLEVEWCGGSETMEEILARLHLREEAAVKRERSMAYAFSHQWRANSSQGLGNYEPGKASWSWSWKDRWIAARPWESRVPSATISPRKDQTMMSSKVKKGNAKGTTTKARRRLSYPATEKKAVQEGKQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02059 269 MobiDBLite consensus disorder prediction 13 41 - -
Spst3g02059 269 MobiDBLite consensus disorder prediction 254 269 - -
Spst3g02059 269 MobiDBLite consensus disorder prediction 224 253 - -
Spst3g02059 269 PANTHER IQ-DOMAIN 5-RELATED 1 238 - -
Spst3g02059 269 MobiDBLite consensus disorder prediction 223 269 - -
Spst3g02059 269 ProSiteProfiles IQ motif profile. 54 82 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02059 Spst-Chr3 55282959 55285680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02059 1 257 IQD Protein Family AT2G33990 50.370 2.97e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02059 - - gmx:100802963 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02059 3 55282959 55285680 Spst3g02059 3 55282959 55285680 ECH
Spst6g00852 6 7783212 7785773 Spst3g02059 3 55282959 55285680 ECH