Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02044 ATGATCGTCTCCTACCAGTTGGGAGGTGTCATGCTGGAATATGCTTCTGATCATGATAACTTCGCTGCAAGTTGTGTTCATTTGATATGTTTCGGCAGAACTTCAGTTTTGGCAATGAAGAAGGTTCCCAAGAACAGCTGCAAGTCTGCATCGCACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTGGATGACCTGCAGGTGATGTTCCTGGATCTGCAGTTTGCTAGGAAAGAGAGTCGCACGGTTGATGCGGCAGTGCTTGAGGAGCAAGTTCATCAAATGCTTCGCGAGTGGAAGGCCGAGCTTAACGAGCCCTCGCCTGCATCTTCGTTGCAGCAAGGTGGCAGTCTTGGGTCATTTTCCACCGATATCTGTCGGCTATTGCAGCTTTGCGATGAGGAAGATGATGCCTCTAGTCCGTTAGCTGCTCCTAAGCCTGAACCTAATGATCAGACACTGCAGGCTGGGGATCTGTGTGGGAGTGATATTAGTTATGCTTCAGAAATGGTTGATACTATTTAA 525 0.4857 MIVSYQLGGVMLEYASDHDNFAASCVHLICFGRTSVLAMKKVPKNSCKSASHRLFKDKAKNRVDDLQVMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCDEEDDASSPLAAPKPEPNDQTLQAGDLCGSDISYASEMVDTI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02044 174 MobiDBLite consensus disorder prediction 137 159 - -
Spst3g02044 174 PANTHER TRANSCRIPTION FACTOR VOZ1 39 159 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02044 Spst-Chr3 54950888 54952911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02044 41 157 VOZ-9 Transcription Factor Family AT1G28520 81.197 3.18e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02044 - - pvu:PHAVU_003G073700g 226.483