Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02040 ATGCTGGTAGAAGTTGTAATTGGTCTGTTGGTGATAGCATTGTTTCTGCACTTGCGTCCCACACCGACAGCTAAATCAAAGGCTCTTCGCCACCTTCCTAATCCTCCAAGCCCAAATCCTCGTCTTCCCTTTGTTGGACACCTTCACCTTTTAAAAGACCAACTTCTCCACCACTCCCTCATTACTCTTTCCCAACGTTATGGCCCTTTGTACTCTCTCTACTTTGGCTCTATGCCCACCGTTGTTGCCTCCACCCCTGACCTGTTCAAACTCTTCCTTCAAACCCACGAGGCTGCTTCCTTCAACACAAGGTTTCAAACCTCTGCCATTAAGCGTCTCACTTATGACAACTCCGTTGCCATGGTTCCCTTTGGACCTTACTGGAAATTCATCAGGAAGGTCATCATGAACGACCTCCTCAACGCCACCTCCGTCAACAAGTTGAGGCCATTGAGGAGCCATGAGGTCCACAAGGTTCTCAGGGTCTTCGCCCAAAGTGCAGAGGCCCAACAACCCCTTAACGTCACCGAGGAGCTTCTCAAGTGGACTAACAGCACCATCTCCATGTTGATGCTAGGTGAGGCTGAAGAGGTTCGAGATTTGGCTCGCGAGACCGTTAAGATTTTCGGGGAATATAGTCTCACTGACTTCATCTGGCCCTTGAAGAAGCTCAAGTTTGGAAAGTATGAGAAGAGGATTGAAGAAATATTCAACAAGTTCGACCCTGTCATCGAGAAGGTTATCAAGAAGCGCCAAGAGATCATCAGGAGAAGAAAGAATGGAGAAGTTGTTGAGGGAGAGCAGAGCGGTGTTTTCCTCGATACTTTGCTTGAATTCGCTGAGGACGAGACCATGGAAATCAAAATTACCAGGGAGCAGATCAAGGGTCTTGTTGTCGACTTCTTCTCAGCAGGGACAGATTCGACGGCTGTGGCAACAGAATGGGCTTTGGCAGAGCTGATCAACAACCCTAAGGTATTGCAAAAGGCTCGAGAGGAGGTGTACAGTGTTGTCGGAGAAGATAGACTTGTGGAGGAAGTTGACACTCAAAACCTTCCATACATTAGAGCCATTGTGAAGGAGACATTCCGCATGCACCCACCACTCCCTGTGGTGAAAAGAAAATGTGTGGCAGAGTGTGAGATTGACGGGTACGTGATCCCAGAAGGAGCATTGATACTTTTCAATGTGTGGGCTGTAGGAAGAGACCCTAAATACTGGGACAGACCATTGGAATTTCGTCCTGAGAGATTCCTACAAACTGGAGCCGAAGGAGAAGTTAGGCCTATTGATTTAAAGGGGCAGCATTTTCAGCTTCTCCCCTTTGGGTCAGGTAGGAGAATGTGCCCCGGAGTGAGTTTGTCTACTTCAGGAATGGCAACACTTCTTGCTTCTGTCATCCAATGCTTTGACCTGCAAGTGGTGGGCCCAGAAGGACACATATTGAAAGGTGATGATGCCAAAGTTAGCATGGAAGAGAGAGCTGGCCTCACTGTTCCAAGGAAACATAACCTCGTCTGTGTTCCACTTGCAAAAACAACCCTCGCAGCCAAACTCCTTTCCTCCTAA 1569 0.4818 MLVEVVIGLLVIALFLHLRPTPTAKSKALRHLPNPPSPNPRLPFVGHLHLLKDQLLHHSLITLSQRYGPLYSLYFGSMPTVVASTPDLFKLFLQTHEAASFNTRFQTSAIKRLTYDNSVAMVPFGPYWKFIRKVIMNDLLNATSVNKLRPLRSHEVHKVLRVFAQSAEAQQPLNVTEELLKWTNSTISMLMLGEAEEVRDLARETVKIFGEYSLTDFIWPLKKLKFGKYEKRIEEIFNKFDPVIEKVIKKRQEIIRRRKNGEVVEGEQSGVFLDTLLEFAEDETMEIKITREQIKGLVVDFFSAGTDSTAVATEWALAELINNPKVLQKAREEVYSVVGEDRLVEEVDTQNLPYIRAIVKETFRMHPPLPVVKRKCVAECEIDGYVIPEGALILFNVWAVGRDPKYWDRPLEFRPERFLQTGAEGEVRPIDLKGQHFQLLPFGSGRRMCPGVSLSTSGMATLLASVIQCFDLQVVGPEGHILKGDDAKVSMEERAGLTVPRKHNLVCVPLAKTTLAAKLLSS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02040 522 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 CDD CYP93 68 509 - -
Spst3g02040 522 PANTHER STEROID 21-HYDROXYLASE-RELATED 14 504 - -
Spst3g02040 522 Pfam Cytochrome P450 36 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Spst3g02040 522 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02040 522 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02040 Spst-Chr3 54851979 54853769 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02040 10 512 Cytochrome P450 AT5G06900 36.311 8.61e-109 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02040 - - gmx:100037450 868.611