Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02035 ATGCCAGTATCCTCAGGATTACCCTCGAACTCGATATTGCACTTCGAACTCGAGATTAGACTTCCTAGCACCAGCAGGGACGAAGATAGCAGAGAAAACACCATGTTGGTGGAAGTTGCAATTGGTTTGTTGGTGTTAGCTTTGTTTCTGCACCTGCGTCCCACACCGACTGCTAAATCAAAGGCCCTTCGCCACCTTCCTAATCCTCCAAGCCCAAAGCCACGCCTTCCCTTTGTTGGACACCTTCACCTTCTAAAAGATCAACTTCTCCACCACTCCCTCATTACTCTCTCCCAACGTTATGGCCCTCTCTACTCTCTCTACTTTGGCTCTATGCCCACCGTTGTTGCCTCCACCCCTGACCTGTTCAAACTCTTCCTTCAAACCCACGAGGCTGCTTCCTTCAACACAAGGTTCCAAACCTCTGCCATTAAGCGCCTCACATACGACAACTCCGTTGCCATGGTTCCCTTTGGACCTTACTGGAAGTTCATCCGGAAGCTCATCATGAACGACCTCCTCAACGCCACCACCGTCAACAAGTTGAGGCCATTGAGGAGCCATGAGATCCGCAAGGTCCTCAGAGTCCTTGCCCAGAGTGCCGAGGCCCAACAACCCCTTAACGTCACCGAGGAGCTTCTCAAGTGGACTAACAGCACCATCTCCATGTTGATGCTAGGTGAGGCTGAAGAGGTTCGAGATTTGGCTCGCGAGGCCGTTAAGATTTTCGGGGAATACAGTCTCACTGACTTCATCTGGCCTTTGAAGAAGCTCAAGTTTGGAAAGTATGAGAAGAGGATAGAAGAAATATTCAACAAGTTCGACCCTGTCATCGAGAAGGTTATCAAGAAGCGCCAAGAGATCGTGAGGAGGAGAAAGAATGGAGAAGTTGTCGAGGGAGAGCAGAGCGGTGTTTTCCTCGATACTTTGCTTGAATTCGCTGAGGACGAGACCATGGAGATCAAAATTACCAAGGAGCAGATCAAGGGTCTTGTTGTCGATTTCTTCTCAGCAGGGACAGATTCGACGGCTGTGGCAACAGAATGGGCTTTGGCAGAGCTGATCAACAACCCTAAGGTGTTGCAAAAGGCTCGAGAGGAGGTGTACAGTGTTGTGGGAAAAGATAGACTTGTTGAGGAAGTTGACACTCAAAACCTTCCATACATTAGAGCCATTGTGAAGGAGACATTCCGCATGCACCCACCACTCCCTGTGGTGAAAAGAAAATGTGTGGCAGAGTGTGAGATTGACGGGTACGTGATCCCAGAAGGAGCATTGATACTTTTCAATGTGTGGGCTGTAGGAAGAGACCCTAAATACTGGGACAGACCACTGGAATTTCGTCCTGAGAGATTCCTAGAGACTGGAGCCGAGGGGGAAGTTGGGCCTATTGATTTAAGGGGGCAGCATTTTCAACTTCTGCCATTTGGGTCAGGTAGGAGAATGTGCCCCGGAGTGAATTTGTCTACTTCAGGAATGGCAACACTTCTTGCGTCTGTCATCCAATGCTTTGACCTGCAAGTGGTGGGCCCACAAGGACACATATTGAAAGGCGATGATGCCAAAGTTAGCATGGAAGAGAGGGCTGGCCTCACTGTTCCGAGGAAACATAACCTCGTCTGTGTTCCACTTGCAAAAACAACTCTCGCAGCTAAACTCCTTTCCCCCTAA 1671 0.4943 MPVSSGLPSNSILHFELEIRLPSTSRDEDSRENTMLVEVAIGLLVLALFLHLRPTPTAKSKALRHLPNPPSPKPRLPFVGHLHLLKDQLLHHSLITLSQRYGPLYSLYFGSMPTVVASTPDLFKLFLQTHEAASFNTRFQTSAIKRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVNKLRPLRSHEIRKVLRVLAQSAEAQQPLNVTEELLKWTNSTISMLMLGEAEEVRDLAREAVKIFGEYSLTDFIWPLKKLKFGKYEKRIEEIFNKFDPVIEKVIKKRQEIVRRRKNGEVVEGEQSGVFLDTLLEFAEDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWALAELINNPKVLQKAREEVYSVVGKDRLVEEVDTQNLPYIRAIVKETFRMHPPLPVVKRKCVAECEIDGYVIPEGALILFNVWAVGRDPKYWDRPLEFRPERFLETGAEGEVGPIDLRGQHFQLLPFGSGRRMCPGVNLSTSGMATLLASVIQCFDLQVVGPQGHILKGDDAKVSMEERAGLTVPRKHNLVCVPLAKTTLAAKLLSP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02035 556 CDD CYP93 102 543 - -
Spst3g02035 556 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 Pfam Cytochrome P450 70 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PANTHER STEROID 21-HYDROXYLASE-RELATED 48 538 - -
Spst3g02035 556 SUPERFAMILY Cytochrome P450 64 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02035 556 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Spst3g02035 556 Gene3D Cytochrome P450 58 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02035 Spst-Chr3 54129704 54131629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02035 35 556 Cytochrome P450 AT5G06900 35.955 4.52e-109 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02035 - - gmx:100037450 909.442