Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02033 ATGGGTTTCTGCAGCAACGGCACTGAAGAGAGTGAACTATATCACGCTCAAATCCACCTCTACAAACACGTGTACAACTTTGTCAGCTCTATGGCTCTCAAGTCCGCCATGGAACTAGGCATAGCGGACGCAATCCACAGCCACGGAGAACCCATGACCCTTTTCGAGTTGGCATCTGCACTGAAACTGCACCACTCCAAAGTCTGTGTTCTCCACCGCTTCCTGCGCCTTCTGACCCACAACGGGTTCTTCACCAAAACAACTGTGGCGTCACGTAAAGAAGGAGGAGGAGGAGGAGAAGAAGAAACAGTGTATGATCTCACCCCTCCTTCCACGCTTCTAATCCGAAGCAAGTCAACGTGTTTGGCACCCATAGTTAAGGGTGCACTTCATTCGAGTTCCCTCGACATGTGGCACTTCTCCGAGAAGTGGTTCACTGAGGATAAGGAGCTCACACTGTATGAGAGTGCCACGGGGGAGAGTTTCTGGGGCTTTTTGAACAAAGCCACTGAGTCTGATACGCTTGGCATGTTTCAAGACGCCATGGCAGCAGATTCTAGAATGTTCAAGATGGCTCTGGAAGAGTGCAAGCATGTGTTTGAGGGATTGGGTTCCCTTGTCGATGTGGGTGGCGGGAATGGTGCTCTCACCAGGCTCATCAATGAAGCCTTCCCTCACCTTAAATGCACGGTGTTTGATCAACCACATGTTGTGGCTAATTTGACTGGAACTGAAAATTTAAACTTTGTAGGTGGAGATATGTTCAAATCCATCCCTTCTGCTGATGCAGTTTTACTCAAGTGGATTCTGCATGATTGGAACGATGAGCTATCAGTGAAGATATTGAAGAAGTGCAAAGAAGCTATTTCTGGTAAAGGGAAAGAAGGAAAGGTGATAATCATAGACATAGCAATTGATGAAACAAATGATGATCGTGAATTGACTGGGTTGAAGCTGGACTATGACTTGGTGATGCTCACCATGTTCAATGGAAAAGAAAGAGAGAGAAAAGAGTGGGAGAAACTTATTTATGATGCAGGCTTCAGCAGCTACAACATTACCCCTATTTGTGGCTTCAAATCTCTTATCCAACTTTATCCTTAG 1104 0.4629 MGFCSNGTEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHSHGEPMTLFELASALKLHHSKVCVLHRFLRLLTHNGFFTKTTVASRKEGGGGGEEETVYDLTPPSTLLIRSKSTCLAPIVKGALHSSSLDMWHFSEKWFTEDKELTLYESATGESFWGFLNKATESDTLGMFQDAMAADSRMFKMALEECKHVFEGLGSLVDVGGGNGALTRLINEAFPHLKCTVFDQPHVVANLTGTENLNFVGGDMFKSIPSADAVLLKWILHDWNDELSVKILKKCKEAISGKGKEGKVIIIDIAIDETNDDRELTGLKLDYDLVMLTMFNGKERERKEWEKLIYDAGFSSYNITPICGFKSLIQLYP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02033 367 Gene3D - 3 114 IPR036388 -
Spst3g02033 367 SUPERFAMILY "Winged helix" DNA-binding domain 10 117 IPR036390 -
Spst3g02033 367 FunFam Coniferyl alcohol 9-O-methyltransferase 4 114 - -
Spst3g02033 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 367 IPR016461 GO:0008168
Spst3g02033 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 363 IPR029063 -
Spst3g02033 367 Pfam O-methyltransferase domain 142 349 IPR001077 GO:0008171
Spst3g02033 367 Gene3D Vaccinia Virus protein VP39 116 367 IPR029063 -
Spst3g02033 367 PANTHER O-METHYLTRANSFERASE 15 350 IPR016461 GO:0008168
Spst3g02033 367 FunFam O-methyltransferase ZRP4 117 367 - -
Spst3g02033 367 CDD AdoMet_MTases 206 305 - -
Spst3g02033 367 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Spst3g02033 367 PIRSF O-mtase 4 367 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02033 Spst-Chr3 54022537 54024478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02033 28 354 Monolignol Biosynthesis Gene Families AT5G54160 34.242 5.99e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02033 K22588 - gmx:100807589 626.706