Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02003 ATGCAGGCTGGCCTGATTCTAGGTCCTGCCATTCAGGTAGAGATATTGGAAAACTACAGAGAGAAGTTGTTTCCATTTCCAAGTCAGGGCACACTTGCAACAGTAACATCAATTGGTTATGCACTTTTCATCTTTACAAGTGGGGTGCAAATGGATTTGAGCATGATAACCAGGACAGGACACAAGGCATGGACCATTGCAATGACTGGATTGTCTGTGCCGTTAATTGTTTGTATTCCAATTGCAAACATATTCACTAAAAATATAAGTATTCATGTTGGAGATGGAGATCAGTTCTTTGATTTTTCCTCTGTAGTGCTCGCAGAAACTATAATTTCATTTGCAGTCGTTGCCTCCCTCCTCAATGAACTTAAAATCCTTAACTCTGAACTTGGCAGGTTGGCATTATCCTCAGTATTGGTGAGTGACATTCTGAGCAAAATCATCACGTGTGTTACCAGTATCTTAAAAGATAGCCAAGATAACTTTAACATTGTAGTACTGTTGGTATCACTGTTTGCCTTTGGCATCTTTGTTCCATTAATTTTTCGGCCTGCAATGTTTTGGATCATCAAACATACTGCAGAAGGAAGGCCTGTGAATGATGCTTATGTCTATCTTATCATCATAATGGTCTTTGCATTAGGTTGGGTTGCAGTTCAAATAGATCAGGACTTTATCCTAGGAGCTTTTATTCTGGGGTTGGCAGTGCCTGAAGGACCACCATTAGGATCAGCATTGGTCAAGAAACTTCACTTCTTTGGTAACTGTTTCTTCTTGCCAATTTTTGTGACTTGCGGCGTGATGAAGGCAGATTATTCCCTACAGTATTATTCATCAGAACTAGTTTTGCTCACTGCTTACATCACTTTTTTCACTCACTTTGTCAAAGTAATGGCATGCACTATACCTGCCCTCTTTTGCAAGATTCCCTTACAAGATGCATTGGCTCTTGGCCTCATTTTGAACGTGAAAGGCGTAGTGGAAGTTGGTGTCTACGGAATCTTATACGACGAGGGGGTAATGTATTTAGTTCCACCTTCCCTTTCCTTTGAATAA 1059 0.4042 MQAGLILGPAIQVEILENYREKLFPFPSQGTLATVTSIGYALFIFTSGVQMDLSMITRTGHKAWTIAMTGLSVPLIVCIPIANIFTKNISIHVGDGDQFFDFSSVVLAETIISFAVVASLLNELKILNSELGRLALSSVLVSDILSKIITCVTSILKDSQDNFNIVVLLVSLFAFGIFVPLIFRPAMFWIIKHTAEGRPVNDAYVYLIIIMVFALGWVAVQIDQDFILGAFILGLAVPEGPPLGSALVKKLHFFGNCFFLPIFVTCGVMKADYSLQYYSSELVLLTAYITFFTHFVKVMACTIPALFCKIPLQDALALGLILNVKGVVEVGVYGILYDEGVMYLVPPSLSFE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02003 352 PANTHER CATION/H + ANTIPORTER 3 336 - -
Spst3g02003 352 Gene3D - 1 345 IPR038770 -
Spst3g02003 352 Pfam Sodium/hydrogen exchanger family 3 341 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02003 Spst-Chr3 52896747 52897805 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02003 9 342 Antiporter Super Family AT3G44900 35.833 4.76e-53 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02003 K26731 - gmx:100797995 508.449