Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02000 ATGTTTGTTGGTGGCACTGCAGCACCAGCAACAGTTACAGTGTGGGCAATGTCAGAACTCATGAGAAACCCAAAGGCGATGGAGAAGGCACAGGCTGAGGTAAGAAAGGTGTTCAATGAGAAAGGGTATGTGGATGAAGCAGACCTTGGACACTGTCAATTCTTAAACTCAGTGATCAAAGAAACACTGAGGCTACATCCCCCAGAGGCATTGCTACTTCCAAGAGAAAACAGTGAGGCATGTGTGATCAATGGGTATGAAATCCCTGCAAAGAGCAAGGTCATTATCAATGCCTGGGCCATTGGAAGAGACCCTATGTATTGGAATGACCCAGATAGGTTTGTACCAGAGAGATTTGAGAACTCCTATGATTTCAGTGGCACACACTTTGAATACATACCCTTTGGGGCTGGAAGGAGAATTTGTCCTGGAGCTGCATTTTCCATGCCAAACATGTTGCTGTCACTGGCCAGTTTGCTTTACCATTTTGTTTGGAAACTGCCAAATGGAACAACACACCAAGAACTGGACATGACTGAGTCCTTCGGTCTTACTGTTAAAAGAGCAAATGATCTTTGCCTAATCCCCATTCTTTATCACCCATCCACAATTGGCCACCAGTAA 624 0.4503 MFVGGTAAPATVTVWAMSELMRNPKAMEKAQAEVRKVFNEKGYVDEADLGHCQFLNSVIKETLRLHPPEALLLPRENSEACVINGYEIPAKSKVIINAWAIGRDPMYWNDPDRFVPERFENSYDFSGTHFEYIPFGAGRRICPGAAFSMPNMLLSLASLLYHFVWKLPNGTTHQELDMTESFGLTVKRANDLCLIPILYHPSTIGHQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02000 207 SUPERFAMILY Cytochrome P450 1 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS E-class P450 group I signature 132 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS E-class P450 group I signature 142 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 Pfam Cytochrome P450 1 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 Gene3D Cytochrome P450 1 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS P450 superfamily signature 142 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 PRINTS P450 superfamily signature 133 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g02000 207 FunFam Predicted protein 2 194 - -
Spst3g02000 207 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 135 144 IPR017972 GO:0005506|GO:0016705
Spst3g02000 207 PANTHER OS08G0105600 PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02000 Spst-Chr3 51630025 51630648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02000 1 197 Cytochrome P450 AT2G45550 46.970 4.02e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g02000 - - vum:124838205 370.163