Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01965 ATGAAAACTACAATATTAGCCTCTGTTGTGGCTGCGTCGTTATTTCTAGTATCGTTCTTAATAGGATTCTTAATCTTCCAATGCGTAAGAAGAGTTAAGACCAGGGGTAGCGACCCGGAGCTTTCAAGCACGCGCTGTCGCGAGTTTTCTTTCGCGGAGATAAGAGCCGCCACCAACAACTTCGACGAGCGATTAATCGTGGGCAGAGGAGGGTTCGGAAACGTGTACAAAGGACAAATCGACACGTGTCACGAACCAGTGGCCATCAAGCGACTCAAGCCGGGTTCGGACCAGGGCGCGCACGAATTCCAAACCGAGATCAGGATGCTCTCGCGGTTCCGCCACGCGCACTTGGTTTCCCTCATTGGGTACTGCAACGACGGTGGAGAAATGATCCTCGTCTATGATTTCATGGAGCGTGGGACCCTCCGCGACCACTTGTACGGCTCGGAGCAGGCGCTGTCGTGGGAGCGGCGGCTGAAGATCTGCCTGGAGGCAGCATGTGGGCTTGACTTCCTCCACAATGGGTCGGACCAGCAGAGCATCATCCACCGCGATGTGAAAAGCACGAACATCTTGCTGGACAAGGATTGGGTGGCCAAGGTGTCGGATTTTGGTTTGTCGAAAGTAGGACCTAATGCATCCCACGTGACAACTGAAGTGAAAGGTAGTATCGGATATTTAGATCCTGAGTATTACATGAGTCTTTGGTTGACTCAGAAATCCGATGTCTACTCTTTTGGTGTAGTTTTACTTGAGGTATTGTGTGGAAGGCCACCCATAGAAAGTAAGGTGGAGAAGCAGAAGCAGCGAGAATTCTTGGTATTGTGGGTGAAGCGGTGTTTTCATGATGGGAATGTGGATGAGATTGTGGATCCTGTTTTGAAAGATACTTTACGACCCAAGTGTTTGAAGAAGTTCCTAGAGATTGCGCTGAGTTGTTTGAATGATCATGGGAACGATCGGCCTTTGATGAGAGACGTGGTGAAGGGGTTGAAGTATGCCTTGAATTTGCAACTGTGTTATACGCAAGGTGAAAGGGAAATCGGCTTGACCCAAATGGAACGTCATGGTGAATTTGACGACAACTTTGCTTCTAGCAGCAGTAAGGCTACGATATGCAAGGAGGAGGAACAAGCCTTGGTGCACGGCATGTTCCCTGAGCTTGGAAATCAAATAGCACGATAA 1188 0.4933 MKTTILASVVAASLFLVSFLIGFLIFQCVRRVKTRGSDPELSSTRCREFSFAEIRAATNNFDERLIVGRGGFGNVYKGQIDTCHEPVAIKRLKPGSDQGAHEFQTEIRMLSRFRHAHLVSLIGYCNDGGEMILVYDFMERGTLRDHLYGSEQALSWERRLKICLEAACGLDFLHNGSDQQSIIHRDVKSTNILLDKDWVAKVSDFGLSKVGPNASHVTTEVKGSIGYLDPEYYMSLWLTQKSDVYSFGVVLLEVLCGRPPIESKVEKQKQREFLVLWVKRCFHDGNVDEIVDPVLKDTLRPKCLKKFLEIALSCLNDHGNDRPLMRDVVKGLKYALNLQLCYTQGEREIGLTQMERHGEFDDNFASSSSKATICKEEEQALVHGMFPELGNQIAR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01965 395 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Spst3g01965 395 Gene3D Phosphorylase Kinase; domain 1 32 137 - -
Spst3g01965 395 PANTHER OS07G0166700 PROTEIN 45 339 IPR045272 GO:0004714|GO:0006468
Spst3g01965 395 ProSiteProfiles Protein kinase domain profile. 61 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01965 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Spst3g01965 395 Gene3D Transferase(Phosphotransferase) domain 1 138 347 - -
Spst3g01965 395 SMART serkin_6 61 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01965 395 FunFam Receptor-like protein kinase FERONIA 33 137 - -
Spst3g01965 395 FunFam Receptor-like protein kinase FERONIA 138 353 - -
Spst3g01965 395 Pfam Protein tyrosine and serine/threonine kinase 67 330 IPR001245 GO:0004672|GO:0006468
Spst3g01965 395 SUPERFAMILY Protein kinase-like (PK-like) 46 330 IPR011009 -
Spst3g01965 395 CDD STKc_IRAK 67 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01965 Spst-Chr3 48497059 48498246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01965 31 339 Receptor kinase-like Gene Family AT3G51550 56.869 4.16e-116 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst3g01965 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01965 - - gmx:100792589 599.742