Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01892 ATGTCAGAGGTATGGCATCTTCTGAAGAAATCACTTCATTGCAAATCTCATTCACCAGAAGTTCATGATCCGCAGGCAAGTAGAAGTGCTCAGAGAAAAACACATTGCAAGAATGTCAGAGATGAGAGAAATAAGAGACAGTCAGAAAACCAAGTTAGCCATGAAATTTTCCTTGATAGGTCAAGTGGTGAGATTAAGATTTGTCCATGCTATCCTAGTTCTCAAGGCGATGAAGATGGAAATGGTGTAGAAGACCCTCATCCTTCGAGATCAACCAAGCCAACTATACCTTCATCAAAGACAGTTTGTGTTGATTGTGATGAATGTAATGTTTTCTCAAAGAAAAAGTGGTCACTGGAGAAAGATTCTAATCATCCCCCAGTATTATCACGTCATAATGAACGTGAGACAACAAAATCTATTGAGACTGCTGAAGAACATGAAAATGTCCCTCAACATTCAGTGATCCAGCTTGAGAGAGAGGGTTCAGCTTGCAAGATCATCGAACAAATATGCCAAGGTAATAACTTTACGGAAAGCAAGGCAGCAGATATTGAATGTGTGTTAAGAGTCCAGAGCAATCAAGAAAGGTTTAGATGGTTTGAGGAATGCAGGGAATTGGTAAGGGTGAAAGCAGAAAGGGTACAAAACGAGCACCCCAGATGCTTGGTTGATGGAAATGAGCTATTGAGATTTCATGGCACAACAGTGGCATGCTCCCTTGGTTTAAATGCCTCTTCTTCTAACCTTTGCACTTTAGACCAATGTGGTGTGTGTCAAATTCTGAAGCATGGTTTTTCCTCCAACCAAGAATTATTTCATGGTGCCCTTGGAGTTTACACCACTTCTACCAGTGGAAAAGCCATCCATTCAATTTCCTCATCCAATATTAAATCTGTCCAGAGAAAGTGTGTAATGCTCTGCAGAGTAAGAGCTGGGAGAATCTATAATCCTCTACAAGAGATTGAAGAAATGACCAATCCTGGGTTTGATTCTTTGGTGAAGAAAATGAGAGACCACTCAGAGATTGAAGAACTCATTGTTTTAAATCCTAGAGCTGTTCTCCCTTGCTTCTTGGTAATCTACCGTTTATGA 1095 0.4037 MSEVWHLLKKSLHCKSHSPEVHDPQASRSAQRKTHCKNVRDERNKRQSENQVSHEIFLDRSSGEIKICPCYPSSQGDEDGNGVEDPHPSRSTKPTIPSSKTVCVDCDECNVFSKKKWSLEKDSNHPPVLSRHNERETTKSIETAEEHENVPQHSVIQLEREGSACKIIEQICQGNNFTESKAADIECVLRVQSNQERFRWFEECRELVRVKAERVQNEHPRCLVDGNELLRFHGTTVACSLGLNASSSNLCTLDQCGVCQILKHGFSSNQELFHGALGVYTTSTSGKAIHSISSSNIKSVQRKCVMLCRVRAGRIYNPLQEIEEMTNPGFDSLVKKMRDHSEIEELIVLNPRAVLPCFLVIYRL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01892 364 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 362 - -
Spst3g01892 364 MobiDBLite consensus disorder prediction 15 56 - -
Spst3g01892 364 MobiDBLite consensus disorder prediction 15 53 - -
Spst3g01892 364 SUPERFAMILY ADP-ribosylation 157 363 - -
Spst3g01892 364 MobiDBLite consensus disorder prediction 69 97 - -
Spst3g01892 364 Gene3D - 145 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01892 Spst-Chr3 40303522 40306511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01892 132 361 C2H2 Transcription Factor Family AT5G54630 45.188 1.14e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01892 - - gmx:102660699 489.96