Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01874 ATGAAAACCACGACAGCATTTTTCTCCTTCCTAACCTCCTCACTAGTTTCTCTTGCCCTTGTCCTTGCCCTTGCCCTTGTCCTTGCCCTTGCACCAACAACAGCAACAACAAAGTTCCAATTCCAAAACACCCTCTCTTCTTCCCCACTCGCCACTCTCTTTGTCACCCTCTTCGCTATTTCCCTTAACTACTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACTACCACCACCGTCAACACGACAACGAAAAACCAAACGCAAAGCTTACTGGGCCTATGGGCTGGCCCATTCTGGGCACTCTGCCTCTAATGGGCTCTCTCGCGCACGCCAAACTCGCTGCTTTAGCTGCGTCGCTAAACGCCAAGAGGTTAATGGCGCTCAGCCTGGGACCCACTCCTGTTGTTATAAGCAGCCATCCCGAGACCGCGAGACAAATTTTATTCGGTTCCTCGTTCTCGGATCGTCCGATAAAAGAATCCGCACGCGCTCTCATGTTTGAGCGAGCGATTGGTTTCGCTCCTTCTGGCACCTACTGGCGGCACCTACGTAGGATCGCGGCGTTTCACATGTTCTCTCCCAGGAGGATTCAGGGCTTGGAGAGTCTCCGGCAGCGCGTGGCTGATGTCATGGTGAAGAGCGCCTGGAAGGAGATGGAGGAGAAAGGGGTGGTGGACATTAGGGGCGTGCTTCAGGAAGGTTCTCTGTGCAATATTTTGGAGAGTGTGTTTGGAAGTAATGATAAGGGGCAGGAGTTGGGTGATATGGTTAAGGAAGGGTATGAGTTGATTGCTAAGTTTAACTTGGAAGATTATTTTCCTCTCAAGTTTTTGGACTTTCATGGGGTGAAGAGAAGGTGCCACACGTTGGCGGCTAAGGTTGTTAGTGCGGTGGGGCAAATTGTGGAGGAGCGAAAACGAGATGGGAGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGTTATCCTTACCCAAAGAAGAAAGGTTGGGTGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTCTTTCGAGGAACAGACACAGTTGCAATACTCCTAGAATGGGTCATGGCCAGGATGGTTTTACACCAAGACGTACAAAAGAAAGCCCGCGAAGAAATCAACACGTGCATCGGCCGAAGGAGTCACGTGCGAGACTCGGATATTGCGAATCTGCCTTACCTACAGGCCATAGTGAAAGAAGTTCTCAGGATGCACCCACCGGGCCCACTACTATCATGGGCCCGCCTAGCAGTCCACGACGTCCACGTGGATAAAGTCCTTGTGCCAGTTGGCACAACAGCCATGGTAAACATGTGGGCAATATCGCATGACCCGTCCATCTGGGAAGACCCATGGGCTTTCAAGCCCGAGCGATTCCTCAAAGAAGACGTTTCCATCATGGGATCCGACTTGAGGCTCGCCCCGTTCGGAGCTGGACGTAGGGTGTGTCCGGGCAGGGCCTTAGGCTTGGCCACTGCCCATCTCTGGCTCGCGGAACTTCTCCGCCACTTCACTTGGCTCCCGGCGCAACATGTGGATCTTTCGGAATCCCTCAGGCTTTCCATGGAAATGAAGACCCCTCTTCGATGCGTAGTGGTTCGTAGATAG 1614 0.5198 MKTTTAFFSFLTSSLVSLALVLALALVLALAPTTATTKFQFQNTLSSSPLATLFVTLFAISLNYWLVPGGFAWRNYHHRQHDNEKPNAKLTGPMGWPILGTLPLMGSLAHAKLAALAASLNAKRLMALSLGPTPVVISSHPETARQILFGSSFSDRPIKESARALMFERAIGFAPSGTYWRHLRRIAAFHMFSPRRIQGLESLRQRVADVMVKSAWKEMEEKGVVDIRGVLQEGSLCNILESVFGSNDKGQELGDMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHTLAAKVVSAVGQIVEERKRDGSFVGKNDFLSTLLSLPKEERLGDSDMVAILWEMVFRGTDTVAILLEWVMARMVLHQDVQKKAREEINTCIGRRSHVRDSDIANLPYLQAIVKEVLRMHPPGPLLSWARLAVHDVHVDKVLVPVGTTAMVNMWAISHDPSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATAHLWLAELLRHFTWLPAQHVDLSESLRLSMEMKTPLRCVVVRR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01874 537 SUPERFAMILY Cytochrome P450 92 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 FunFam Cytochrome P450 78A5 82 537 - -
Spst3g01874 537 Gene3D Cytochrome P450 75 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
Spst3g01874 537 PANTHER CYTOCHROME P450 78A7-RELATED 31 537 - -
Spst3g01874 537 Pfam Cytochrome P450 92 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 CDD CYP78 123 530 - -
Spst3g01874 537 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS E-class P450 group I signature 119 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g01874 537 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01874 Spst-Chr3 36009446 36011644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01874 30 537 Cytochrome P450 AT1G13710 50.573 4.84e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01874 - - gmx:100817944 877.47