Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01841 ATGGAAATCTTTCGTCCTCAGAGTCGCAGGAACTTCGTGTCTTCCTCCAACGACGCCGTTTCTGTTCCCACCATTCCCCTTTATCGCTCTGCTCCCCCCATTGAAGTAAGGCTCGAGGAGTTCGAGTCCTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGGATTTCTGATGGTATGTCGCGGGGGAAAAAACCGGAAGAATTGGAAAATTTGGTAAAGGACTTGTGGAAAGTGAATATGAGACACCAACACGCATCTGAGGTTCTGAACAAGGATATTATATCTCATTTTGTTCTACGTCTTGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCATGGAATCTGCACTCTTTCGCTACCGTTTTCGTCTTCTAAATGCTGAAGCTCAGAGGGCAGTCATGGAAGAATTTGACCTTCCTTACAGGGCCGTCAGCAATGTAGAATTTGAGAGTATAAAGGAGAAACTGGGACAAGTTGCACGCTCTATTGGTCAGCCTTCACCCACTGCTGATGCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGACCTTGTGGCTGGGCGGAAAGTATTAATTAAACAAGGAAAGGCCTATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACTGTTCCGCAGTCAGTTGTCAAAGACCCTCATCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAACAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCCTGTGCTCAAGTTATCTGGGTCCTGATTATTCTCAGTCAAGAGACTATGGTGATATATCATTGAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTTGGTCTCTTTCTCAAGGGTGTTGGCTTGAATCTAGATGATGCACTTGCGTTTTGGAGGGCAGAGTTCTCTAAAAAGGTTGGGTTGGAGAAGTTTGAGAAACAATACGCATACACCATACGTCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACGCCCTATTCTTGTACAAAGATTATTTCATCAACTCCTGGAACTGGAGATCATCATGGTTGCCCCTATCGACATTTTAGCGAGGAGAATCTACGAGCTGCTCTCGGCACAATGGGGGTAAACAGTCGAGCAATGGAAGATGTGATAGACAAAGTCAGAAATAGACATTATCAGTTGGCTTGCACCTTGACATTTGAAGCTCTTCATGGCATGCCGTGTGATGCAGGGATTAACCATCCAAATCAATACTTTAGTGACAGTAAAAAGATATTGCAGTCAAAGAAGGATTCTTCAGCCTAG 1374 0.4381 MEIFRPQSRRNFVSSSNDAVSVPTIPLYRSAPPIEVRLEEFESFAIDRLRVLKGISDGMSRGKKPEELENLVKDLWKVNMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMESALFRYRFRLLNAEAQRAVMEEFDLPYRAVSNVEFESIKEKLGQVARSIGQPSPTADAIFYKVPFEEVPDLVAGRKVLIKQGKAYVAMNQIVSLVATLFRSQLSKTLILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDYSQSRDYGDISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKQYAYTIRHNYGKEGKRTDYTPYSCTKIISSTPGTGDHHGCPYRHFSEENLRAALGTMGVNSRAMEDVIDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSKKILQSKKDSSA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01841 457 PANTHER DNA PRIMASE LARGE SUBUNIT 21 452 IPR007238 GO:0006269
Spst3g01841 457 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Spst3g01841 457 FunFam DNA primase large subunit 5 250 - -
Spst3g01841 457 Gene3D - 4 250 - -
Spst3g01841 457 PIRSF DNA_primase_large 3 457 IPR016558 -
Spst3g01841 457 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01841 1 456 Core DNA Replication Machinery Family AT1G67320 66.667 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01841 K02685 - gmx:100806321 853.588