Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01828 ATGGTGATATTGATTTTCGAAATTTTTGATACACTGGGAGTGGGAAGACATATACCATGTGGGGTCCTGCCAGTGCTTTGTCAGGTAATAATTCAGCAAATGGCAAACAAGGTCTTGCGCCTCGTGTGTTTGAAAGAATCTTTGCTCGCATTAGTGAAAAGTGGTCTTTTGTTGCTCACTCAGATTAGAGAAGATGTCAAATCGGGTGTGTATGTTGAAAATCTTACAGAGGTGCAAGTTTGTACGAAGGAAGATGTGACTCAGCTTTTGATAAAGGTGTGTTTCGTCACAGTTGAACCTGAGGCAGCGTTGCTTGGTGGAGAAGGTGATTGCCTTGGAGGAGAGTCATCGCCTGATTTTGATACAGAAGATGGTTTGTTAAACAAGAGGATTGGTGCAACCAGTATAAATGCTGAAAGTTCACGTTCACATACTGTTTTTACTTGTGTGGTTGAATCTCGATCCAAGAGCATTGCAGATGGTGTAAGCAAATTTAGAACAAGTAAAATAAATCTTGTTGATCTAGCTGGTTCAGAACGACAAAAGTTAACGGGTGCAGCGGGAGACCGTTTGAAGGAAGCCAGCAACATCAATAGATCACTTTCACAGCTGGGGAATTTGATAAACATTCTTGCTGAAGTTTCTCAAACAGGAAAGCAGCGGCATATACCATATAGAGACTCCAAGTTGACATTTTTATTGCAGGAGTCTCTGGGAGGGAATGCAAAATTAGCATTGGTTTGTGCTGTTTCTCCAGCACAAAGTTGTAAGAGTGAAACTTTTAGTACACTGAGATTTGCACAACGTGTCAAAGCTATCAAGAACAAAGCAGTTGTTAATGAAGTAATGCATGATGATGTTAATCATTTGCGCGAGGGTGAGCTGCATCGAGTTAAAACAAATGGTTACAATCTAAGTGATGGAAGTGGAAGTCATTCAGCAGCTTTGATCCAAAAGAGTTTGAATTTGTTGCAGTGTAGCCTCAATCATCCATTATCACTACCTCATGTTGATGATGATGGTGATGAGGAGATGGAAATTGACAATGACGGTGTTGAGGGTCATGCTGTACTTGTCCACAATTCAAATGGAGGCTTTGCTGGTATTTCAGCCCCTAATGAAGCTAGTGGTTCTCCTAGTGCTATGAATTGTGACACCCCTGCTAGCCTGAGCATAGTTCAATGCAAAACACCCCCCATCATCAAATCCCCAACTCCCAGTCTTTCACCAACAATCAGCTGCAGCAGGAAAAGTTTGAGAACCTCACTAAAGCAATCTCCTTCTGAGAATAATCTTCATGGTGAGAGTGATTTAGCCACAAAAACTGTTGACAAAAAATGTTTGTCAACTGCTCTGTGTAGCCAGACAGCTCCATATTTCCTTCCTAAAACTGAAAATTTAGCAGCAAGCATCCTCCATGGTCTTGAAATTATTGATAGTCACCATCATGGTCGTTCACCCAAAGACTCAAGGCTAACTTTTCCAGTGAACAAAGTTGATGTGGGAGTCCAGACTATTCTAGACAATAATTCCAAAATGGAAGATTATGATATGTTTACCAGTAATAACTGCAAAATCAGAACACAGCTTGATAAAAATGAAATTGACAATAGCTCAACTGTGCAGCCGGTCCCCATTGATTGTCCAAAGTCTACTGCTAAGCCAAAGAGACAAGTTTTGAAAGCAGTAGAGAGAGTCTTGGCAGGATCCATAAGGAGAGAAATGGCACTGGAAGAGCTCTGTGCAAAGCAAACTTCTGAGATAATGCAGCTCAATTACTTATTACAAAAGTACAGGCATGAGAGGGAATGCAATGTCATAATAGCACAGATAAGAGAAGATAAAATTCTTCGCCTTCAAAGCCTTATGGATGGTGTTTTATCCACCGAGGAGTTCATGGATGAAGAGCTGGTGTCCGTTACACATGAAAACAAGGACTTGTCTGCTATCAACACTGAACAGATTTTAAAAGAGAACCACGAGCATCATCTAGAAGTTCTGAAGATGAAGATAGAGTTAAAAAGAGTACATGATGAGTTACAAGAGTATCAGAATTTTTACCAGTTTGGGGAGAGGGAAGTGTTGATGGAAGAGATATGTAGTCTAAGATATCAGCTTCATTTTTATGTTGACTCTTCATCCACATCCGCAACGAAGCAAAGTCCGCTATTTCAGTTGGCAGCAAACCTCAATGCAATTCCAGATTCAACAGCGGCCAGCTCTAAGGCAAATGAAAATCCAGAATCAGCTGAAGACAGAGCCAAACTAAAACATGAACAGGAAAAAAATCAATGGACTGAGGCAGAAAGTAGGCGGATTTCTCTAACTGAAAAACTGAGAGCTGAACTTGAAGCTAGCAGGTCACTAGCTGAAAAGAGGAAGCAAGAACTAGATACTGAGAGGAAGTGTGTTGAGGAACTGAATAAAACAATGCAAGTGGCTATAGAAGGTCATGTACGAATTCGAGAACAGTATGCTGATTTAGAAGACAAACATATCCAATTGCTTGAAAGGTATAGAAAGATTGAGTATGGAATTGATGATGTTAAGCAAGCAGCTTCCAGAGCAGGTGTAAGAGGTGCAGAGTCTAAATTCATAAATGCCCTTGCTGCAGAAATTTCAGCATTAAAAGCAGAAAAAGAAAAGGAAAGTGAGGCCTTGAGAGTTGAAAATAGAGGTCTTCGGGCTCAACTGAAGGATACTACTGAAGCAGTGCAAGCTGCAGGTGAGCTTCTTGTGCGACTTAAAGAAACACAAGAAGGTGTCATTACTGCACAGAAGCCGGCGATGGATGCAGAGCTGGAAGCTGCAAAGGCCTACAAGCAAATTGATAAATTAAAGAAGAAACATGAGAGGGAGATTAGAACACTTAATGTGCTACTTGCAAAAACACCTAATGATGAAATACAACCTAGTTTTGATGACTTTGTCATGCCTACTTATGATGACACCAAGGTGCAACACAATGTTGATGGTCAATTTAAGTTATTTTGTAACGAAGAGGAGAGTGAGCTTACAAAATTGGCAGAACAATCATGGTTCTCTGGTTATGACACATGA 3060 0.4062 MVILIFEIFDTLGVGRHIPCGVLPVLCQVIIQQMANKVLRLVCLKESLLALVKSGLLLLTQIREDVKSGVYVENLTEVQVCTKEDVTQLLIKVCFVTVEPEAALLGGEGDCLGGESSPDFDTEDGLLNKRIGATSINAESSRSHTVFTCVVESRSKSIADGVSKFRTSKINLVDLAGSERQKLTGAAGDRLKEASNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSKLTFLLQESLGGNAKLALVCAVSPAQSCKSETFSTLRFAQRVKAIKNKAVVNEVMHDDVNHLREGELHRVKTNGYNLSDGSGSHSAALIQKSLNLLQCSLNHPLSLPHVDDDGDEEMEIDNDGVEGHAVLVHNSNGGFAGISAPNEASGSPSAMNCDTPASLSIVQCKTPPIIKSPTPSLSPTISCSRKSLRTSLKQSPSENNLHGESDLATKTVDKKCLSTALCSQTAPYFLPKTENLAASILHGLEIIDSHHHGRSPKDSRLTFPVNKVDVGVQTILDNNSKMEDYDMFTSNNCKIRTQLDKNEIDNSSTVQPVPIDCPKSTAKPKRQVLKAVERVLAGSIRREMALEELCAKQTSEIMQLNYLLQKYRHERECNVIIAQIREDKILRLQSLMDGVLSTEEFMDEELVSVTHENKDLSAINTEQILKENHEHHLEVLKMKIELKRVHDELQEYQNFYQFGEREVLMEEICSLRYQLHFYVDSSSTSATKQSPLFQLAANLNAIPDSTAASSKANENPESAEDRAKLKHEQEKNQWTEAESRRISLTEKLRAELEASRSLAEKRKQELDTERKCVEELNKTMQVAIEGHVRIREQYADLEDKHIQLLERYRKIEYGIDDVKQAASRAGVRGAESKFINALAAEISALKAEKEKESEALRVENRGLRAQLKDTTEAVQAAGELLVRLKETQEGVITAQKPAMDAELEAAKAYKQIDKLKKKHEREIRTLNVLLAKTPNDEIQPSFDDFVMPTYDDTKVQHNVDGQFKLFCNEEESELTKLAEQSWFSGYDT 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01828 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 284 IPR027417 -
Spst3g01828 1019 Coils Coil 780 807 - -
Spst3g01828 1019 PANTHER KINESIN-LIKE PROTEIN KIN-12D 61 91 IPR044986 -
Spst3g01828 1019 Coils Coil 866 904 - -
Spst3g01828 1019 Coils Coil 929 963 - -
Spst3g01828 1019 ProSitePatterns Kinesin motor domain signature. 168 179 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst3g01828 1019 Pfam Kinesin motor domain 125 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g01828 1019 ProSiteProfiles Kinesin motor domain profile. 1 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g01828 1019 MobiDBLite consensus disorder prediction 737 769 - -
Spst3g01828 1019 PRINTS Kinesin heavy chain signature 134 151 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g01828 1019 PRINTS Kinesin heavy chain signature 169 187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g01828 1019 PRINTS Kinesin heavy chain signature 223 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g01828 1019 SMART kinesin_4 5 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst3g01828 1019 MobiDBLite consensus disorder prediction 404 437 - -
Spst3g01828 1019 MobiDBLite consensus disorder prediction 746 769 - -
Spst3g01828 1019 Coils Coil 818 838 - -
Spst3g01828 1019 Gene3D Kinesin motor domain 21 294 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01828 Spst-Chr3 30924300 30932341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01828 49 299 Calmodulin-binding Proteins AT5G65930 37.008 2.40e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01828 K10400 - gmx:100790067 1381.7