Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01807 ATGGTGTTTTTTTGTTTTCTAAATTTGGATGTTGAAGGGCACGAGAGTCATGGAGTTCATTTGTGTCACAAATGTGGATGGCCATTTCCAAATCCACATCCTAGTGCCAAACACAGGCGTGCTCACAAGAAGATCTGTGGAACCATTGAAGGTTACAAACAGTCTGTCTCTGAGGGACAGCCCCATTTGAATGGGTCAGATGATGAACATGTTTCTGATGATGATCACAAAACGCCAGGTTCGGTTTTGTCAGGTTCAAATTTCTCGGAAACAGGCAACAATGAGAAGGGCAATGCAGGAAATGTAGAGAAATCTATTAGATCGGAATATGAGGTGTTTACGGATGCAGTTGCAGACTTTTCGGATAGTGGATCAAATCCAGATATTAAGGACCGGTTGCAAGATAGTTTGGACTACGGAGCTGATATGGAACTTGTAGATTCAAAAGAACCTAAATTTTCAGGAATTTCTGAAGACAAAGAGTTCAATGGTGGGAAGATAGTTTTTACACCACATTTCCTTTTATTAACTTGA 534 0.4045 MVFFCFLNLDVEGHESHGVHLCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYKQSVSEGQPHLNGSDDEHVSDDDHKTPGSVLSGSNFSETGNNEKGNAGNVEKSIRSEYEVFTDAVADFSDSGSNPDIKDRLQDSLDYGADMELVDSKEPKFSGISEDKEFNGGKIVFTPHFLLLT 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01807 177 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Spst3g01807 177 MobiDBLite consensus disorder prediction 56 101 - -
Spst3g01807 177 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 12 150 - -
Spst3g01807 177 MobiDBLite consensus disorder prediction 63 77 - -
Spst3g01807 177 MobiDBLite consensus disorder prediction 79 101 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst3g01807 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01807 - - var:108327251 272.322