Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01777 ATGGATAATAAACCCACCACCAACAACAACCGTCACTCCTACATCAACGAACAAGATGACTCTGATGCAGCTCAAGAAAACATTGCCGACTCCCCTCCTTCTTCCTCTCTCTTCAACATCGATGGCTTAGTCACCTCCCCCACTTCCTCATCAAAGAGAAGGAGGGCAATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAGAGCAACACCCCACCGTCGGATTCATGGGCATGGAGAAAGTACGGGCAGAAACCCATCAAGGGTTCACCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCGAAGGGGTGCCCGGCACGGAAACAAGTGGAAAGGAGCTGCCTGGACCCCACAATGTTGGTCGTCACTTACTCCTCCGACCACAACCATCCCTGGCCAGCTTCTAGAAACAACGCCAGGCCCACAAAGAAGCCCGAGCCCGAGCCGGTCACGGACCCGGTCGAACCGGAGCCGGAACCGGAGGAGAAGTTCGCGGACCTAGGCGGGGAGTCCATGATCACGACCGCGGACGAGATGGGGTGGCTGGGGGAGATGGAAACGACGACGTCCACCGTTCTCGAAAGCCCAATTATGGCCGTAGGGTACCATGCTGACGTGGCGTCGGCGTTGCTGCCGATGAGGGAGGAGGACGAGTTGCTCTTTGCCGACCTCGGGGAGCTGCCGGAGTGCTCCGTCATGTTCCGGCAGGGGCTTCTGGCGGAGCAGCGGCGGTACACGGCGCCGTGGTGCGGGACCACAAGTTGA 795 0.5786 MDNKPTTNNNRHSYINEQDDSDAAQENIADSPPSSSLFNIDGLVTSPTSSSKRRRAIQKRVVQIPIKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCLDPTMLVVTYSSDHNHPWPASRNNARPTKKPEPEPVTDPVEPEPEPEEKFADLGGESMITTADEMGWLGEMETTTSTVLESPIMAVGYHADVASALLPMREEDELLFADLGELPECSVMFRQGLLAEQRRYTAPWCGTTS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01777 264 MobiDBLite consensus disorder prediction 1 58 - -
Spst3g01777 264 MobiDBLite consensus disorder prediction 1 52 - -
Spst3g01777 264 MobiDBLite consensus disorder prediction 151 174 - -
Spst3g01777 264 MobiDBLite consensus disorder prediction 136 174 - -
Spst3g01777 264 Gene3D WRKY domain 71 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01777 264 ProSiteProfiles WRKY domain profile. 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01777 264 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 242 IPR044810 GO:0003700
Spst3g01777 264 SMART WRKY_cls 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01777 264 Pfam WRKY DNA -binding domain 84 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01777 264 SUPERFAMILY WRKY DNA-binding domain 80 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01777 264 FunFam WRKY transcription factor 65 59 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01777 Spst-Chr3 23901346 23902707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01777 19 246 WRKY Transcription Factor Family AT1G29280 56.067 2.84e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g01777 WRKY 5.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01777 - - gmx:100127392 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01777 3 23901346 23902707 Spst3g01777 3 23901346 23902707 ECH