Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01769 ATGAAGAATTGTGATGAATGGAAACCTTTCCTAGTAATGATAGCAATTGATTTTTCTTTAACCATGGTGAACATTCTTCTCAAGAAAGTCCTTCAAGAAGGAATGAACCATTTGGTTTTTATCACATATCGTCTGTCAGTTTCTACTATATTTCTGGCCCCCATCAGCTACTTTAAGGAAAGAAATAGAAGACCACGGCTAACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCCATTATTGGGGCATCCGTCACACAATACTTCTTCCTTTTGGGGATCCAATACACCTCAGCCACATTTGCCTGTGCCTTTGTCAATATGGTGCCGGTGATGACCTTCATTATGGCATTGCCATTTGGGCTAGAAACAGTGAACATTAAATGCAAAGGTGGCAAAGCGAAGATTCTCGGGACATTTGTGTGCGTAGGAGGGGCATTAATGTTGACACTTTACAGAGGAAAGCCCTTCTTTGATGTCTCTCACCATGAAACTGCAGTTCCTCCAGTAGCCATGAGATCTGCAATGGATCAAGCTGCTTCTAGTGCAAGAACAACACAGAAATGGACCATTGGTGTAGTAGCCTTGATCATGGGAACCCTCTTTTGGTCTTTTTGGTTTATTCTACAGTCAAAAATAGGGAAGAGCTATCCTTGCCAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTGTCCACTGGCAGCAACTTGTCCTCCTGGGTTCTCAAGGACAAGATACAAATAATCACTGTTCTTTATTCTGGGATGGTTGGGTCAAGCGTGTGCTACGTGGGTATGTCATGGTGCGTGAAGAAGAGGGGTCCAGTCTTTACCGCAGCATTCAGTCCTCTTGTTCAGATAATGTCGGGCATGATTGATATCCCAGTCTTGCACGAGCAGCTTCATCTTGGAAG 941 0.4325 MKNCDEWKPFLVMIAIDFSLTMVNILLKKVLQEGMNHLVFITYRLSVSTIFLAPISYFKERNRRPRLTFQILCYLFFSAIIGASVTQYFFLLGIQYTSATFACAFVNMVPVMTFIMALPFGLETVNIKCKGGKAKILGTFVCVGGALMLTLYRGKPFFDVSHHETAVPPVAMRSAMDQAASSARTTQKWTIGVVALIMGTLFWSFWFILQSKIGKSYPCQYSSTAIMTFFGAMQAAILGLSTGSNLSSWVLKDKIQIITVLYSGMVGSSVCYVGMSWCVKKRGPVFTAAFSPLVQIMSGMIDIPVLHEQLHLG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01769 313 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Spst3g01769 313 Pfam EamA-like transporter family 191 312 IPR000620 GO:0016020
Spst3g01769 313 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020
Spst3g01769 313 PANTHER WAT1-RELATED PROTEIN 8 312 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01769 Spst-Chr3 23783876 23785745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01769 7 263 Nodulin-like Gene Family AT3G30340 48.249 1.37e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01769 - - gmx:100791663 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01769 3 23783876 23785745 Spst6g00914 6 8374991 8377554 PCT