Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01763 ATGGCAGACCATACCCACAACAAGATGTCCACTTCTGTTGTCGATGGGAATGATTCCCTTACTGGTCACATCATATCCACTACAGTAGGAGGAAAAAATGGGAAGCCCAAACAGACTAGAAGTTACCTGGCAGAACGCATTGTGGGGACTGGGTCATTTGGAATTGTCTTCCAGGCTAAATGCATGGAAACTGGGGAGCCAGTGGCCATTAAGAAGATTTTACAGGACAAAAGTTATAAGAATCGTGAGCTACAACTGATGCGCATGATGGACCATCCAAATGTGATCTCTCTGAAGCACCGTTTCTTTTCCACTACAAGTGCGGATGAAATTTTTCTTAATTTGGTGATGGAATACGTTCCAGAGTCTATGTACCGAGTCTCAAAGTTCTATAGTAATACAAATCAGAGCATGCCACTTATCTTTGTAAAACTTTACATGCACCAGATTTTCCGGGGGCTGGCTTATATCCACACTGTCCCTAGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATTCTGGTTGATCCTCTTACACACCAGGTTAAGATATGCGATTTTGGAAGTGCGAAAGTGCTGGTTAAAGGTGAAGCTAATATATCACACATATGTTCACTTTTCTATCGAGCACCGGAACTTATATTTGGTGCTACTGAGTATACTACTTCAATTGATATTTGGTCTGCTGGTTGTGTCCTTGCTGAACTGCTTTTGGGCAAGCCATTATTTCCTGGTGATAATGCAGTGGACCAACTTGTAGAAATTATCAAGGTTCTTGGCACACCTTCTGAGGAGGAAGTTTGCTGTACGAATTCAAACAGTAATGATTTCAAGTTTTCACAGATATTCCACGAAAAAATGCCTCCAGAAGCCATTGATCTTGCTTCCCGGCTTCTGCAGTATTCCCCAACTCTTCGATGTACTGCGCTGGAAGCATGTGCTCACCCATTCTTTGATGAGCTCCGTGAGCCCAATGCTCACTTGCCAGATGGTCGTCCATTTCCCCCTCTATTCAACTTTAAACAAGAGTTATCTGGAGCATCTCCAGAGCTTATTGATAAGTTGATACCTGATCATGTGAAGCGGAAGATAGGGCTACGACATACTCGTTTTGCTGGAACATGA 1125 0.4293 MADHTHNKMSTSVVDGNDSLTGHIISTTVGGKNGKPKQTRSYLAERIVGTGSFGIVFQAKCMETGEPVAIKKILQDKSYKNRELQLMRMMDHPNVISLKHRFFSTTSADEIFLNLVMEYVPESMYRVSKFYSNTNQSMPLIFVKLYMHQIFRGLAYIHTVPRVCHRDLKPQNILVDPLTHQVKICDFGSAKVLVKGEANISHICSLFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGKPLFPGDNAVDQLVEIIKVLGTPSEEEVCCTNSNSNDFKFSQIFHEKMPPEAIDLASRLLQYSPTLRCTALEACAHPFFDELREPNAHLPDGRPFPPLFNFKQELSGASPELIDKLIPDHVKRKIGLRHTRFAGT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01763 374 Gene3D Phosphorylase Kinase; domain 1 27 121 - -
Spst3g01763 374 FunFam Glycogen synthase kinase-3 beta 26 121 - -
Spst3g01763 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Spst3g01763 374 SMART serkin_6 42 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01763 374 ProSiteProfiles Protein kinase domain profile. 42 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01763 374 Pfam Protein kinase domain 44 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01763 374 CDD STKc_GSK3 37 321 IPR039192 -
Spst3g01763 374 FunFam Shaggy-related protein kinase kappa 122 361 - -
Spst3g01763 374 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 362 - -
Spst3g01763 374 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
Spst3g01763 374 Gene3D Transferase(Phosphotransferase) domain 1 122 361 - -
Spst3g01763 374 SUPERFAMILY Protein kinase-like (PK-like) 37 342 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01763 Spst-Chr3 23701840 23706439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01763 48 321 Core Cell Cycle Gene Families AT3G48750 36.552 1.57e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Spst3g01763 Pkinase 5.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01763 K14502 - gmx:100812801 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01763 3 23701840 23706439 Spst6g00902 6 8300062 8303997 PCT
Spst6g01851 6 17630316 17635636 Spst3g01763 3 23701840 23706439 PCT