Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01761 ATGAAGCCCTTTTGCAGATTCTTGATTCTCCTATCGCTATTTTCTCTGGTGGAATCTTCATGCAACAGTGAAGAAGAGCACTTCTTGGTGTCAAAGGCTTTCAAATCAGTCTCTGGCTTCAACGCTTCCTCCTGGTTCAAAACCATATGCTCACAAGCTCACATCACCAGAATAGTACTTCCAAACCAAAATCTCACTGGCACAATCTCCTGGGGTTACCTGAGGAACATGTCCAACCTGCAGGTTCTCGATCTCTCTGGGAATTCCTTACAAGGCCACGTGCCAAGCTGGTTTTGGTCAACTTCATCCTTATTCGAAATAAACCTCTCCAGAAACAAGTTCGGAGGGAGCGTAATGATCCACTCCTCCAAACCCACATCACAAAACACCTCGTTTTCGTTTTCATTTTCATCTATTCAAACGCTCAACCTCTCCCACAACAGGTTCACCAATTCAATCCAACTTTCCGCCTTCCAGAACCTTCAAATCCTCGACCTTTCCAACAACAACCTCAGAACACTCCCCTCCGGACACCAGAACCTCTCCAAGCTTCGACACCTCGACCTCTCAAGCTGTAATCTCCAAAGCAACGTAAAACCCGTTTCCTCTCTTCACTCACTTCGCTACTTGGACTTATCAAACAACACCTTCACGGGAAATTTTCCTTCTGATTTCCCTCCACTCGCCACCCTCGAATTCCTCAACATCTCCTACAACAACTTCACCTCGTCAACTAGCCTAACCAAGTTCATCCGGTTCGGTAAATCAGCTTTTGTCCACGCTGGCAACAACTTCACCTACGACAACACCACGTCCAACACGACCAACAGCAGTAAAAACTCACCGCAAGCCACCCACAACAAACAACACAAGCGAAAATCCAAAACGCTGATTGCAGCAGCGTCGTCTGCAGGATCAGCACTTGTCCTAATTCTGTTGTCCATTTGGGTACTCCGCATTATTATTCAGAAGAGGAAGGAACGCGCCAAGAGGAACAAGTGGGCGATTTCCATGCCGGTCCCACATGCGATGAACGTGGTCACTAGCAGGGTGGAGAAATCAGGGCCGTTCGCGTTCGAGACTGAATCGGGGTCAACGTGGGTGGCTGACCTGAAGGAACCGTCTTCTGCGCCGGTGGTGATGTTCGAGAAGCCCTTGATGAACCTCAGCTTCAAGGACCTCATTGTTGCCACGTCACACTTCGGGAAAGACTCGCTGCTCGCGGAGGGAAGGTGTGGGCCCGTTTACAGAGCCGTTCTGCCCGGGGACCTCCACGTGGCAATCAAGGTCCTGGAACACGCCAGAGACGTTGATCCTGATGACTCGGTCGCCACGTTCGTTGACCTCTCCAGACTCAAGCACCCCAACTTGTTGCCCCTCTCCGGTTACTGCATTGCTGGTAAAGAGAAACTGGTACTGTACGAATACATGGCGAACGGCGATTTAGGAAGGTGGCTACACGAGCTGCCAACTGGGGACACCAACGTGGAGGATTGGACAGGCGACACGTGGGAGATTCAAAACGGCGTCGTGGACGACGGATCCCCAGAAAAGATGGGGTGGCTGACACGACACCGTATCGCGGTTGGGATAGCGCGTGGCCTCGCGTACCTGCACCACGCGCATTCGAAGCCCGTGGTGCACGGCCACCTCGTCACCTCCAACATTCTACTCGCCGACGATTTCGAGCCCCGGATCTCCGATTTCGGTTTGCGACCTGGACCGAATCCGAACGGCGGCACGGAGGCCGACGTGTACTGCTTCGGAGCGGCGCTGATGGAGCTCCTAACGGGGAAGGAGAGCACGGCAGAGACGGTGGCGGCGGCTAGGAAGGCGGTGAGGGAGGGTCACAGCGTTAGAGTTCTGGACGAGAGGCTCCTACTCGGTGGTGAGTCAGTGGTGGGTGAGATGGTAGAGACTCTCCGAGTGGCGTTTTTGTGTACGGCGGAGCAGCCATGGAAAAGGCCCACAATGCAGCAAGTTTTGGGTTTGCTGAAGGATATTCGTCCTCATCAACAGCAACTCGTCACGAGTTGA 2037 0.5282 MKPFCRFLILLSLFSLVESSCNSEEEHFLVSKAFKSVSGFNASSWFKTICSQAHITRIVLPNQNLTGTISWGYLRNMSNLQVLDLSGNSLQGHVPSWFWSTSSLFEINLSRNKFGGSVMIHSSKPTSQNTSFSFSFSSIQTLNLSHNRFTNSIQLSAFQNLQILDLSNNNLRTLPSGHQNLSKLRHLDLSSCNLQSNVKPVSSLHSLRYLDLSNNTFTGNFPSDFPPLATLEFLNISYNNFTSSTSLTKFIRFGKSAFVHAGNNFTYDNTTSNTTNSSKNSPQATHNKQHKRKSKTLIAAASSAGSALVLILLSIWVLRIIIQKRKERAKRNKWAISMPVPHAMNVVTSRVEKSGPFAFETESGSTWVADLKEPSSAPVVMFEKPLMNLSFKDLIVATSHFGKDSLLAEGRCGPVYRAVLPGDLHVAIKVLEHARDVDPDDSVATFVDLSRLKHPNLLPLSGYCIAGKEKLVLYEYMANGDLGRWLHELPTGDTNVEDWTGDTWEIQNGVVDDGSPEKMGWLTRHRIAVGIARGLAYLHHAHSKPVVHGHLVTSNILLADDFEPRISDFGLRPGPNPNGGTEADVYCFGAALMELLTGKESTAETVAAARKAVREGHSVRVLDERLLLGGESVVGEMVETLRVAFLCTAEQPWKRPTMQQVLGLLKDIRPHQQQLVTS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01761 678 Gene3D Phosphorylase Kinase; domain 1 361 476 - -
Spst3g01761 678 FunFam Calmodulin-binding receptor kinase CaMRLK 137 247 - -
Spst3g01761 678 SMART LRR_typ_2 181 205 IPR003591 -
Spst3g01761 678 SMART LRR_typ_2 158 179 IPR003591 -
Spst3g01761 678 SMART LRR_typ_2 77 100 IPR003591 -
Spst3g01761 678 Gene3D Ribonuclease Inhibitor 131 252 IPR032675 -
Spst3g01761 678 PRINTS Leucine-rich repeat signature 204 217 - -
Spst3g01761 678 PRINTS Leucine-rich repeat signature 161 174 - -
Spst3g01761 678 SUPERFAMILY Protein kinase-like (PK-like) 378 669 IPR011009 -
Spst3g01761 678 MobiDBLite consensus disorder prediction 269 293 - -
Spst3g01761 678 Pfam Leucine Rich Repeat 206 225 IPR001611 GO:0005515
Spst3g01761 678 ProSiteProfiles Protein kinase domain profile. 401 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01761 678 MobiDBLite consensus disorder prediction 269 284 - -
Spst3g01761 678 FunFam Putative LRR receptor-like serine/threonine-protein kinase 362 476 - -
Spst3g01761 678 ProSiteProfiles Leucine-rich repeat profile. 160 181 IPR001611 GO:0005515
Spst3g01761 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 581 669 - -
Spst3g01761 678 Pfam Protein tyrosine and serine/threonine kinase 405 571 IPR001245 GO:0004672|GO:0006468
Spst3g01761 678 Pfam Leucine rich repeat 54 114 IPR001611 GO:0005515
Spst3g01761 678 Pfam Leucine rich repeat 138 194 IPR001611 GO:0005515
Spst3g01761 678 SUPERFAMILY L domain-like 44 244 - -
Spst3g01761 678 Gene3D Ribonuclease Inhibitor 19 130 IPR032675 -
Spst3g01761 678 Gene3D Transferase(Phosphotransferase) domain 1 477 573 - -
Spst3g01761 678 Gene3D Transferase(Phosphotransferase) domain 1 574 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01761 Spst-Chr3 23670708 23673291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01761 55 668 Receptor kinase-like Gene Family AT5G07280 30.653 5.28e-73 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Spst3g01761 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01761 - - gmx:100788556 1056.97