Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01750 ATGATCACAGCCAAGCCCTTGGGGTCTGCGTTGCTGTTGCTTGGTCGGATTTCAAGGAGGAGAAACATAGATCGTAATACTTGGCGTTCTTGCAGTCAAGAAACAGTGTTCGGAAACGCGTTTACGTTGAGTTTGTCTTCCGTTTCAAGAATTAGTAATTTACCGGAATTTGGGCTTGAAGTCAGAGGACAAATTCTTGCAATAGTCCATGTAGGACTCATGTCACGTAGCTCTAATATTCATGAGTTGGCCCATACCTTTCTCGACGAGGCTTTCTCAAGTATTATCTGCGAGGAAGATCTTGTTTGGACAGAAGATGGTGAGAAGATTTGGGTCCTAGATCAACTATCTTTGGAAGGGACATTGGCTCCAGAACTTGGGAAACTTAGTTTTGATGAAAAAGATATTAACCAGAACTTAATAAATCTAGTCAATTTACGACGCAAGTTGCTTGATCAGTCAAGTAATCTTGCAGCTGCACCTTTCAGTGATGGACCTACTATACAAATCACCCCTATTCCAATTACTCAGAGCAGTGGAGCTTTCCCAGCTTTTCGTGAGAGACAGATATCTGCACAATATCCTTCTCCTTCTACTTTTCCATTTGTGGATCAAACAATTCCACAAAATTCAACTAATGGTGCTAATGGAAGATTATGGAAGTATACTATTATAGCAGCAGGATTAGCGGTCTTGTTCAGTGTTGTTTTAATCATGCTTCTTATCTGGCGAAAACGAGCCGCTAAAGTAATAAAACCATGGAAATCAGGAATAAGTGGAGAACTGCAGAAAGCATTTATAACAGGTGTTCCCAAGTTGAATTTGGCAGAGTTGGAGACAGCATGTGAAGATTTTAGCAATATTATTAATAGTTTTGAAGGATGTACAATATACAAAGGAACACTATCTAGTGGGGTTGAGATTGCAGTTCATTCAACCATTCTTACTTCAGCCAGTTATTGGTCGAAGAACATGGAGATGGCTTATCGCAAGAAGATTGCTACCTTATCCCGTCTTAACCATAAGAACTTTACCAATCTTATTGGCTACTGTGACGAAGAACAACCTTTTAAAAGAATGATGGTATTTGATTATGATTCGAATGGAAGCTTATTTGAACATTTGCATGTTAAAGAAGCTGAACATCTTGATTGGGATACAAGAATGAGAGTTATTATGGGGACGGTTTATTGTCTTCATTACATGCACCATGATCTGAATCCACCTGTAGCTCATTCCAATCTTACATCAATTTCAATATTATTAACAGATGACTTTGCTGCTAAGATATCAGAATTTGCTTTTGACAGGAGAGTATTACACTGTGCTGCTGCAGATGAGTCACATAAAGCTGAGTTGCCACCTCATCCTGATCCTGAAACCGATGTCTATAATTTTGGAGTGTTATTGCTTGAAATCATTTCTGGAAAACTACCTTACTCTGAACAAGAAGGCCATCTTGTTAATTGGGCTGTTGAGCACTTGAATGATAAACAAAGCGCCAAAAATATGATCGATCCTTCCCTAGAGTCTTTCAAAGAAGAAGATCTTGATGTCATATGTGAGGTGATCAAAGCATGTCTTCAATCTGATGGAAGGTTAAGACCAACAATGATGGACCTAACTCTCAGATTGAGGGAAGTACTCCATGTATCACCTGAACAAGCTGTTCCAAGACTTTCTCCTCTATGGTGGGCTGAATTGGAAATCTTGTCATTGGAGACCACGTAA 1731 0.3934 MITAKPLGSALLLLGRISRRRNIDRNTWRSCSQETVFGNAFTLSLSSVSRISNLPEFGLEVRGQILAIVHVGLMSRSSNIHELAHTFLDEAFSSIICEEDLVWTEDGEKIWVLDQLSLEGTLAPELGKLSFDEKDINQNLINLVNLRRKLLDQSSNLAAAPFSDGPTIQITPIPITQSSGAFPAFRERQISAQYPSPSTFPFVDQTIPQNSTNGANGRLWKYTIIAAGLAVLFSVVLIMLLIWRKRAAKVIKPWKSGISGELQKAFITGVPKLNLAELETACEDFSNIINSFEGCTIYKGTLSSGVEIAVHSTILTSASYWSKNMEMAYRKKIATLSRLNHKNFTNLIGYCDEEQPFKRMMVFDYDSNGSLFEHLHVKEAEHLDWDTRMRVIMGTVYCLHYMHHDLNPPVAHSNLTSISILLTDDFAAKISEFAFDRRVLHCAAADESHKAELPPHPDPETDVYNFGVLLLEIISGKLPYSEQEGHLVNWAVEHLNDKQSAKNMIDPSLESFKEEDLDVICEVIKACLQSDGRLRPTMMDLTLRLREVLHVSPEQAVPRLSPLWWAELEILSLETT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01750 576 Pfam Protein tyrosine and serine/threonine kinase 297 543 IPR001245 GO:0004672|GO:0006468
Spst3g01750 576 Gene3D Transferase(Phosphotransferase) domain 1 367 557 - -
Spst3g01750 576 Gene3D Phosphorylase Kinase; domain 1 254 365 - -
Spst3g01750 576 SUPERFAMILY Protein kinase-like (PK-like) 268 544 IPR011009 -
Spst3g01750 576 FunFam Inactive receptor-like serine/threonine-protein kinase 257 365 - -
Spst3g01750 576 PANTHER PROTEIN MALE DISCOVERER 2 152 573 - -
Spst3g01750 576 ProSiteProfiles Protein kinase domain profile. 248 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01750 Spst-Chr3 22852544 22860815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01750 244 545 Receptor kinase-like Gene Family AT3G58690 27.385 2.32e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Spst3g01750 PK_Tyr_Ser-Thr 4.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01750 - - gmx:100808098 664.455