Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01749 ATGGCTGAGGTCACTACAAAGAAGGAAAACCCGAACCTTCTGCTGGGTAGGTTCGAGCTGGGAAAACTCCTGGGGCACGGAACCTTCGCGAAGGTCCACCATGCGCGGAACATCAAAACCGGGGATGGAGTGGCCATCAAAATCATAAACAAGGAAAAGATCCTCAAGGGCGGTTTGGTGTCTCACATCAAGCGCGAGATCTCCATCCTCCGCCGCGTCCGCCATCCCAACATCGTCCAACTCTTCGAAGTCATGGCCACCAAAACCAAGATCTACTTCGTCATGGAGTACATCCGTGGTGGCGAGCTCTTCAACAAGGTCGCCAAGGGAAGGTTGAAGGAAGAAGTTGCCAGAAAGTACTTCCAGCAACTGGTTTCAGCGGTGGAGTTTTGCCACGCGCGTGGGGTGTTTCACAGGGACATTAAGCCCGAGAACTTGTTACTGGACGAGGATGGGAACCTTAAAGTCTCAGACTTTGGACTCAGTGCCGTGTCGGATCAGATTAGGCAGGACGGGCTGTTTCACACGTTTTGTGGGACACCTGCGTATGTTGCTCCCGAGGTTTTGGCGCGGAAAGGGTATGATGGTGCCAAGGTTGATATTTGGTCCTGTGGGGTTGTTTTGTTTGTTTTGATGGCAGGGTATTTGCCTTTCCATGACCGTAATGTTATGGCCATGTATAAGAAGATTTACAAGGGTGAATTTCGGTGTCCCAGATGGTTCTCTCCTGAACTTACTAGACTTCTCTCTAGGCTTCTTGATACCAACCCTCAGAGCAGGATTTCTATTCCTGAAATCATGGAGAATCGGTGGTTCAAGAAGGGTTTCAAGCAGATCAAGTTCTATGTGGAGGATGATAGAGTTTGTAGCTTTGATGATAAGTTGCAGTTACAGCCCCATGATGGTGGTGGGGATGATGATTTGGGGACATCGGATTCTGAGGTTGAAATTCGGAGGAAGAATAGTCATACTAATAGTAATGCTTCGTTGCCCAGGCCTGCGAGTTTGAATGCATTTGACATCATATCGTTTTCTCAGGGCTTTGATCTCTCCGGGTTGTTCGAGGAAAAGGGGGATGAGGCCAGGTTTGTGTCTTCTGCTCCTGTGTCTAAGATTATATCCAAATTGGAGGAGGTTGCTCAGCTGGTTAGCTTCACGGTGAGGAAGAAAGATTGCAGGGTGAGCTTGGAGGGTTGTAGAGAAGGTGTGAAAGGGCCTTTGACCATTGCTGCTGAGATTTTTGAGTTGACACCTTCCTTGGTGGTGGTGGAGGTGAAGAAAAAGGGAGGGGATAAGGCAGAGTATGACAAGTTTTGTAACTCTGAGTTGAGGCCCGCGTTGGAGAATTTGGTTACGGAGGAATCTGCTTCTTCATCTTGTCAATCTACACACATTGAATCTGAACTGTATCAACGAACACTCTCTGACTCTGCCCTTAACATACATTCGGAAAGTGAAAGTTTGTACCAACAAGACTTGGCTGAAGTAGAAAAAACTAGTATCCGAAAACATGGTGAATCAATATTCGAAATCTCATAG 1539 0.4756 MAEVTTKKENPNLLLGRFELGKLLGHGTFAKVHHARNIKTGDGVAIKIINKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYIRGGELFNKVAKGRLKEEVARKYFQQLVSAVEFCHARGVFHRDIKPENLLLDEDGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVVLFVLMAGYLPFHDRNVMAMYKKIYKGEFRCPRWFSPELTRLLSRLLDTNPQSRISIPEIMENRWFKKGFKQIKFYVEDDRVCSFDDKLQLQPHDGGGDDDLGTSDSEVEIRRKNSHTNSNASLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSAPVSKIISKLEEVAQLVSFTVRKKDCRVSLEGCREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKAEYDKFCNSELRPALENLVTEESASSSCQSTHIESELYQRTLSDSALNIHSESESLYQQDLAEVEKTSIRKHGESIFEIS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01749 512 FunFam Non-specific serine/threonine protein kinase 8 322 - -
Spst3g01749 512 CDD STKc_SnRK3 17 271 - -
Spst3g01749 512 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Spst3g01749 512 ProSiteProfiles NAF domain profile. 331 355 IPR018451 GO:0007165
Spst3g01749 512 FunFam Non-specific serine/threonine protein kinase 333 451 - -
Spst3g01749 512 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 447 - -
Spst3g01749 512 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01749 512 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01749 512 SUPERFAMILY Protein kinase-like (PK-like) 14 273 IPR011009 -
Spst3g01749 512 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Spst3g01749 512 Gene3D Transferase(Phosphotransferase) domain 1 8 328 - -
Spst3g01749 512 CDD CIPK_C 337 447 - -
Spst3g01749 512 Gene3D Kinase associated domain 1, KA1 333 453 - -
Spst3g01749 512 Pfam NAF domain 333 389 IPR004041 GO:0007165
Spst3g01749 512 Pfam Protein kinase domain 19 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01749 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01749 Spst-Chr3 22840320 22841858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01749 13 465 CBL-interacting serine-threonine protein kinases AT4G18700 77.948 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst3g01749 Pkinase 5.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01749 - - gmx:100807567 875.544